| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5227 |
|---|
| Symbol | |
|---|
| ID | 9249120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 379845 |
|---|
| End bp | 380939 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_003683113 |
|---|
| Protein GI | 297564140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.012301 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCCC TGAACGGAAT CCGCGTCGTC GAGTTCACCG GGATCGGCCC GGCTCCGATG
GCCGGGATGC TCCTCGCCGA CCTGGGCGCC AGCGTCATCC GCCTCGACCG CCCCGCGGCC
GCCGACGCGA TGAACTCCGG AGCGGGCGGA CCCCACCTGA GCGAGGGGCG CACCGTCCTG
CCCGCCGACC TCAAGTCCGA GGAGGGCCTC GCGCTCGCCC GCGACCTGGC CTCCCGCGCC
GACGTGCTCC TGGAGGGCTT CCGCCCCGGG GTCATGGAGC GCCTGGGCCT GGGCCCCGAG
GTCTGCCTGG AGGCCAACCC GCGCCTGGTC TACGCGCGGG TCACCGGCTG GGGCCAGGAC
GGGCCGCTCG CCCGCGCCGC CGGGCACGAC ATGAACTACA TCTCCGTGAA CGGCGCCCTG
CACGCCATCG GGCGCGCGGG GGGCCCGCCG GTCCCCCCGG TCAACCTCCT GGGCGACTTC
GCCGGGGGCA CCATGTTCGC GGTCACCGGC GTCCTCGGCG CGCTGGTCGA GCGCCAGTCC
TCCGGTCGCG GCCAGGTCGT GGACGCCGCG ATGGTGGACG GCAGCGCGCT GCTGATGTCG
ATGCTGCACG AGGACCGCGC GCGCGGTTCC TGGAGCGACG AGCGCGGCAC CAACTACCTG
GACACCGGCG CCCCCTGGTA CGACGTCTAC GAGTGCGCCG ACGGCCGGTA CGTGTCGGTC
GGCTGCATCG AGCCCCAGTT CTACGCCGCG TTCCTGGAGG GCACCGGCCT GGCCGGGGAG
GACCTGCCCG ACCAGTGGGA CCGGTCGGGC TGGCCCCGGC TGCGGGAGCG GTTCGCCGAG
GTCCTGCGCA CCCGTACCCG CGACGCGTGG GGCGAGGTGT TCGAGGGCGC CGACGCCTGC
GTGATGCCCG TCCTGTCCCT GGAGGAGGCC CCCGACCACC CGCACGTGCG CGCCCGCGGC
TCACTCGTGC GCGACGGCGA CCGGATCCTG TCGGGCCCGG CCCCGCGCTT CGACCGCACC
CCGGGCGGGG TCACCCGGGG CGCCGAGCAG CCCGACACCG CGCGGACCCT CCGGGAGTGG
GGCCTCACCC CCTGA
|
|---|
| Protein sequence | MGPLNGIRVV EFTGIGPAPM AGMLLADLGA SVIRLDRPAA ADAMNSGAGG PHLSEGRTVL
PADLKSEEGL ALARDLASRA DVLLEGFRPG VMERLGLGPE VCLEANPRLV YARVTGWGQD
GPLARAAGHD MNYISVNGAL HAIGRAGGPP VPPVNLLGDF AGGTMFAVTG VLGALVERQS
SGRGQVVDAA MVDGSALLMS MLHEDRARGS WSDERGTNYL DTGAPWYDVY ECADGRYVSV
GCIEPQFYAA FLEGTGLAGE DLPDQWDRSG WPRLRERFAE VLRTRTRDAW GEVFEGADAC
VMPVLSLEEA PDHPHVRARG SLVRDGDRIL SGPAPRFDRT PGGVTRGAEQ PDTARTLREW
GLTP
|
|---|
| |