Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5225 |
Symbol | |
ID | 9249118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 376390 |
End bp | 376863 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | anti-sigma-factor antagonist |
Protein accession | YP_003683111 |
Protein GI | 297564138 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0769527 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCATC AGCTTGGCCA CCGCGGTAAC ACGACCAACG TCCCGGTCGG CACGCGCTCG TGGAGCCGCG TGCGGCCCAC CGCGCCGATC CGTCAGGCGA GGCCCGAATA CGCCGGAGTC GCCATGCCCG ACCTGAACAT CTCCTCCACC CTGCACGACG CCGGACGGGT CCTGGCGTTG GACGGGGAGA TCGACATGGC CACCGAGCAC CGCTTCCAGG AGGCGGTGAC CGAGGCTCTG ACCACGCAGC CCTTCGGCCG TGTGGTCCTG GACTGCGCCG ACCTGCGGTT CATCGACTCC AGCGGTCTGC GCGTCCTGAT CCGCGCGCAC AAGGCGGCCA AGGAGCAGAA GGCGGTCCTG GCCATCGCCT CACCCATCCA CCGGGTGCTC CAGACCCTGC GGGTGACCTC GCTCGACACG CGCATCCCCG TCTTCACGAC GGTTTCGGAG GCGCTCACGG CGCCGCGCGC CTAG
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Protein sequence | MNHQLGHRGN TTNVPVGTRS WSRVRPTAPI RQARPEYAGV AMPDLNISST LHDAGRVLAL DGEIDMATEH RFQEAVTEAL TTQPFGRVVL DCADLRFIDS SGLRVLIRAH KAAKEQKAVL AIASPIHRVL QTLRVTSLDT RIPVFTTVSE ALTAPRA
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