Gene Ndas_5225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5225 
Symbol 
ID9249118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp376390 
End bp376863 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID 
Productanti-sigma-factor antagonist 
Protein accessionYP_003683111 
Protein GI297564138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0769527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCATC AGCTTGGCCA CCGCGGTAAC ACGACCAACG TCCCGGTCGG CACGCGCTCG 
TGGAGCCGCG TGCGGCCCAC CGCGCCGATC CGTCAGGCGA GGCCCGAATA CGCCGGAGTC
GCCATGCCCG ACCTGAACAT CTCCTCCACC CTGCACGACG CCGGACGGGT CCTGGCGTTG
GACGGGGAGA TCGACATGGC CACCGAGCAC CGCTTCCAGG AGGCGGTGAC CGAGGCTCTG
ACCACGCAGC CCTTCGGCCG TGTGGTCCTG GACTGCGCCG ACCTGCGGTT CATCGACTCC
AGCGGTCTGC GCGTCCTGAT CCGCGCGCAC AAGGCGGCCA AGGAGCAGAA GGCGGTCCTG
GCCATCGCCT CACCCATCCA CCGGGTGCTC CAGACCCTGC GGGTGACCTC GCTCGACACG
CGCATCCCCG TCTTCACGAC GGTTTCGGAG GCGCTCACGG CGCCGCGCGC CTAG
 
Protein sequence
MNHQLGHRGN TTNVPVGTRS WSRVRPTAPI RQARPEYAGV AMPDLNISST LHDAGRVLAL 
DGEIDMATEH RFQEAVTEAL TTQPFGRVVL DCADLRFIDS SGLRVLIRAH KAAKEQKAVL
AIASPIHRVL QTLRVTSLDT RIPVFTTVSE ALTAPRA