Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5224 |
Symbol | |
ID | 9249117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 375531 |
End bp | 376226 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | putative integral membrane protein |
Protein accession | YP_003683110 |
Protein GI | 297564137 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.083822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGGGCGACG TCTGGCGGGA AGTGCTGTCG GTCCAGCCCG AACCGGAGCG GTGGATCATC GTCACCGCGG CGGTGCTGGC CCTGGCGGCC GTGCTGCTCG GACCGCCCTG GCGGATCGGG CGCAACGTCG TCACCATCGC CCACGAGGGC GGGCACGCCC TGGTCGCCCT GCTCAGCGGC CGCCAGCTCA CCGGGATCCG CCTGCACTCG GACACCTCCG GGGTCACCGT GTCCCGGGGC AAACCGACCG GCGTCGGCAT GGTCCTGACC GTCTTCGCGG GCTACGTCGC CTCGTCGGTC ATCGGCCTGC TCGGCATCCT CATGCTCATG TCGGACCGCG TCACCGCCCT GCTGTGGCTG AGCATCGTGG TGCTCGCCGC CATGCTCCTG ATGATCCGCA ACGTCTACGG CGTGGTGTCG ATCGTGGTGA CCGGCGCGGT GGTGTTCGGG ATCAGCTGGT TCACCCCGCC GGAGGTGCAG GCGGCCTTCG CCTACCTGTT CATCTGGTTC CTGCTCTTCG CGGGCGTGCG GCCGGTGATC GAACTCCAGG CCCAGCGCAG GCGCAACCCC TCACCGCACT CCGACGCCGA CCAGCTGGCC CGTCTCACCG GCGTGCCGGG AACCCTGTGG GTCGTGGTCT TCTTCCTGGT CAACGCGGCC GTGACCGGCC TCGGTGTCTG GCTGCTGCTC TTCTAG
|
Protein sequence | MGDVWREVLS VQPEPERWII VTAAVLALAA VLLGPPWRIG RNVVTIAHEG GHALVALLSG RQLTGIRLHS DTSGVTVSRG KPTGVGMVLT VFAGYVASSV IGLLGILMLM SDRVTALLWL SIVVLAAMLL MIRNVYGVVS IVVTGAVVFG ISWFTPPEVQ AAFAYLFIWF LLFAGVRPVI ELQAQRRRNP SPHSDADQLA RLTGVPGTLW VVVFFLVNAA VTGLGVWLLL F
|
| |