Gene Ndas_5224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5224 
Symbol 
ID9249117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp375531 
End bp376226 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative integral membrane protein 
Protein accessionYP_003683110 
Protein GI297564137 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.083822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGACG TCTGGCGGGA AGTGCTGTCG GTCCAGCCCG AACCGGAGCG GTGGATCATC 
GTCACCGCGG CGGTGCTGGC CCTGGCGGCC GTGCTGCTCG GACCGCCCTG GCGGATCGGG
CGCAACGTCG TCACCATCGC CCACGAGGGC GGGCACGCCC TGGTCGCCCT GCTCAGCGGC
CGCCAGCTCA CCGGGATCCG CCTGCACTCG GACACCTCCG GGGTCACCGT GTCCCGGGGC
AAACCGACCG GCGTCGGCAT GGTCCTGACC GTCTTCGCGG GCTACGTCGC CTCGTCGGTC
ATCGGCCTGC TCGGCATCCT CATGCTCATG TCGGACCGCG TCACCGCCCT GCTGTGGCTG
AGCATCGTGG TGCTCGCCGC CATGCTCCTG ATGATCCGCA ACGTCTACGG CGTGGTGTCG
ATCGTGGTGA CCGGCGCGGT GGTGTTCGGG ATCAGCTGGT TCACCCCGCC GGAGGTGCAG
GCGGCCTTCG CCTACCTGTT CATCTGGTTC CTGCTCTTCG CGGGCGTGCG GCCGGTGATC
GAACTCCAGG CCCAGCGCAG GCGCAACCCC TCACCGCACT CCGACGCCGA CCAGCTGGCC
CGTCTCACCG GCGTGCCGGG AACCCTGTGG GTCGTGGTCT TCTTCCTGGT CAACGCGGCC
GTGACCGGCC TCGGTGTCTG GCTGCTGCTC TTCTAG
 
Protein sequence
MGDVWREVLS VQPEPERWII VTAAVLALAA VLLGPPWRIG RNVVTIAHEG GHALVALLSG 
RQLTGIRLHS DTSGVTVSRG KPTGVGMVLT VFAGYVASSV IGLLGILMLM SDRVTALLWL
SIVVLAAMLL MIRNVYGVVS IVVTGAVVFG ISWFTPPEVQ AAFAYLFIWF LLFAGVRPVI
ELQAQRRRNP SPHSDADQLA RLTGVPGTLW VVVFFLVNAA VTGLGVWLLL F