Gene Ndas_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5222 
Symbol 
ID9249115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp374121 
End bp374564 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content69% 
IMG OID 
ProductPolyketide cyclase/dehydrase 
Protein accessionYP_003683108 
Protein GI297564135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.178812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.128048 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC ACAGGGTTGC GCGGAGCGTC GTGGTCGACG CTCCCGCCAA GCGGATCTTC 
GACATCATCG CGGCGCCGGA ACGGCACGCC GAGTTCGACG GCTCCGACAC CGTCCTCTCC
AGCCTCTTCG GGCCGGAGCG GCTGGAGAGG GGCAGCGAGT TCGGCATGGA CATGAGGATG
TTCGGCGTCG GCTACCGGAT CACCAACCGG GTGGTGGAGT ACGAGGAGGA CCGCCTCATC
GCCTGGCGGC ACTTCGGTCC GCACCGCTGG CGCTACGAGC TGGAGGAACT GGCGGAGGGG
GGCACCCGCG TCACGGAGAC CTTCGACTAC TCCAGGGGCC TGCCGGCCTT CTACGTCCTC
ATGGGGATGC CCGCGAGGAA CGCGCGGAGC ATCGAGCAGA CGCTGGTGCG CCTCAAGGCC
GCGGCGGAGT CGCGGGAGGA CTGA
 
Protein sequence
MAKHRVARSV VVDAPAKRIF DIIAAPERHA EFDGSDTVLS SLFGPERLER GSEFGMDMRM 
FGVGYRITNR VVEYEEDRLI AWRHFGPHRW RYELEELAEG GTRVTETFDY SRGLPAFYVL
MGMPARNARS IEQTLVRLKA AAESRED