Gene Ndas_5216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5216 
Symbol 
ID9249109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp367501 
End bp368229 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content70% 
IMG OID 
Productectoine/hydroxyectoine ABC transporter, permease protein EhuC 
Protein accessionYP_003683102 
Protein GI297564129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.294278 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACTTCC TGATCCAGCG GCTACCGCTC TACGCCGAGG GCGCGTGGGT CACCATCCAG 
CTCACCCTCG GAGGCATCGC GCTGGCCTTC GTCCTCGCCA TGGTCTTCGG GATCATGGGG
ACGATCCGCC ACTGGCTCCC CCGGGCCGTC GCCACGGTCT ACGTGGAGGT GTTCCGGGGC
ATCGCCGCCC TGGTGCTGAT GTTCTGGATG GCGTTCGCCC TGCCCCAGCT GACCGGTTAC
CAGCTGGCCG ACAACTTCGC CGCGATCCTC GCCGTGGGGC TCAACCTGGG CGCCTACGGG
GCCGAGGTCG TGCGCTCCTC CATCAACGCC GTGCCCAGGC CGCAGGTCGA GGCCACCGTC
GCGCTGAACC TCTCCTGGTT CCAGCGGACG CGCCTGGTCG TGCTGCCCCA GGCCTGGGCC
CAGATGCTGC CCACGTTCGG CAACCTCAAC ATCGAGCTGA TGAAGGCCAC CGCGGTGTCC
TACCTCATCG GTGTGGCCGA CCTGACGGCC GTGGCGCAGA ACATGCGCCA GGCCACGGGT
GAGACGGTGA TCGCCTTCAT CGGCGCCTTC GTCCTCTACT ACCTGATCGC GCAGGTGCTC
ATCCTCGGCA TGCGACTGCT CGAACGCCGC GCCAACCGCA AGCTGGGCCG CGCCGCACCG
GGCGGCGGAG GCCTGGCGTC CCTCCTGCGG CCCCCGGCCG TCGACGCGAA GGCGGGGGTG
GCCAAGTGA
 
Protein sequence
MDFLIQRLPL YAEGAWVTIQ LTLGGIALAF VLAMVFGIMG TIRHWLPRAV ATVYVEVFRG 
IAALVLMFWM AFALPQLTGY QLADNFAAIL AVGLNLGAYG AEVVRSSINA VPRPQVEATV
ALNLSWFQRT RLVVLPQAWA QMLPTFGNLN IELMKATAVS YLIGVADLTA VAQNMRQATG
ETVIAFIGAF VLYYLIAQVL ILGMRLLERR ANRKLGRAAP GGGGLASLLR PPAVDAKAGV
AK