Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_5216 |
Symbol | |
ID | 9249109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 367501 |
End bp | 368229 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | ectoine/hydroxyectoine ABC transporter, permease protein EhuC |
Protein accession | YP_003683102 |
Protein GI | 297564129 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.294278 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACTTCC TGATCCAGCG GCTACCGCTC TACGCCGAGG GCGCGTGGGT CACCATCCAG CTCACCCTCG GAGGCATCGC GCTGGCCTTC GTCCTCGCCA TGGTCTTCGG GATCATGGGG ACGATCCGCC ACTGGCTCCC CCGGGCCGTC GCCACGGTCT ACGTGGAGGT GTTCCGGGGC ATCGCCGCCC TGGTGCTGAT GTTCTGGATG GCGTTCGCCC TGCCCCAGCT GACCGGTTAC CAGCTGGCCG ACAACTTCGC CGCGATCCTC GCCGTGGGGC TCAACCTGGG CGCCTACGGG GCCGAGGTCG TGCGCTCCTC CATCAACGCC GTGCCCAGGC CGCAGGTCGA GGCCACCGTC GCGCTGAACC TCTCCTGGTT CCAGCGGACG CGCCTGGTCG TGCTGCCCCA GGCCTGGGCC CAGATGCTGC CCACGTTCGG CAACCTCAAC ATCGAGCTGA TGAAGGCCAC CGCGGTGTCC TACCTCATCG GTGTGGCCGA CCTGACGGCC GTGGCGCAGA ACATGCGCCA GGCCACGGGT GAGACGGTGA TCGCCTTCAT CGGCGCCTTC GTCCTCTACT ACCTGATCGC GCAGGTGCTC ATCCTCGGCA TGCGACTGCT CGAACGCCGC GCCAACCGCA AGCTGGGCCG CGCCGCACCG GGCGGCGGAG GCCTGGCGTC CCTCCTGCGG CCCCCGGCCG TCGACGCGAA GGCGGGGGTG GCCAAGTGA
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Protein sequence | MDFLIQRLPL YAEGAWVTIQ LTLGGIALAF VLAMVFGIMG TIRHWLPRAV ATVYVEVFRG IAALVLMFWM AFALPQLTGY QLADNFAAIL AVGLNLGAYG AEVVRSSINA VPRPQVEATV ALNLSWFQRT RLVVLPQAWA QMLPTFGNLN IELMKATAVS YLIGVADLTA VAQNMRQATG ETVIAFIGAF VLYYLIAQVL ILGMRLLERR ANRKLGRAAP GGGGLASLLR PPAVDAKAGV AK
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