Gene Ndas_5174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5174 
Symbol 
ID9249067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp317121 
End bp318686 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content71% 
IMG OID 
ProductSpermine synthase 
Protein accessionYP_003683060 
Protein GI297564087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGAGA CCACCGTCCG CGCACGGCCC CGACTGCCGG TATCCGCCAG GGCGGCCCGG 
TTCCTCGTGT TGTTGGCGGT GTTCGTCTGC GCCGCCTGCG GCCTGGTGTA CGAGCTCGCG
CTGGTCGCCA TCGGCAGCTA CCTGCTGGGC GACAGCATCA CCCAGGCCTC CGTGGTCCTG
TCGGTGATGG TGTTCGCGAT GGGCGTGGGC TCCCTGTTGT CCAAGCGCTT CCAGGCGCAC
CCCGCCGCGG CCTTCGCGGT GATCGAGGGC CTGCTCTCGC TGGTCGGCGG ACTGTCCGTG
CTGCTGCTGT ACGGGGCGTT CGCCTGGTTC TCCGCCTACC AGCCCGCCCT GGTGGTGCTG
TCGTTCGCCA TCGGGCTCCT CATCGGCATG GAGATCCCGC TGCTGATGAC GCTGATCCAG
CGCATCCGCA GGCAGGAGGC CTCCGACGCG GTCGCCGACC TGTTCGCCGC CGACTACGTG
GGCGGCCTGA TCGGCGGCCT GGCCTTCCCG TTCCTGCTGC TCCCGCTGCT GGGCCTGCCC
AAGGGCGCGC TGATGGTGGG CGCGCTCAAC GCCGTCGTCG GCGTGGCGGT GGTGCTGTGG
CTGTTCCGCG CGGAGCTGAC CCGGCGGGCC TACGCGGGCC TGAGCCTGGG CCTGGCGTTC
ATCATCGCGG TGCTCGGCCT GGCCTACGCC TACGCCGACC AGTTCGAGGT GGACGCGCGC
CAGGCGCTGT ACCGGGACCC GATCGTGCAC GCCGAGCGCT CGGAGTACCA GGAGATCGTG
CTCACCCGGT CCCTGGACGG CCAGGACGTG CGCCTGTTCC TCAACGGGAG CCTCCAGTTC
TCCAGCCTGG ACGAGTACCG CTACCACGAG TCGCTGGTGC ACCCGGCGAT GGCGGGACCG
CACGAGGACG TGCTGGTGCT GGGCGGCGGC GACGGCCTGG CCCTGCGCGA GATCCTGGCC
TACGACGACG TGGCCTCGGC CACCCTCGTG GACCTGGACC CGGCCGTGAT CGAGCTGGCC
TCGACCGACC CGGTGATCAG CGACCTCAAC GGGGACTCCC TCGAGGACCC GCGCGTGGAC
GTGGTCAACG CCGACGCCTT CCAGTGGCTG CGCGAGAACC GCGAGGAGTT CGACGTCATC
ATCGCCGACC TCCCGGACGG GGACTCCGTG GGCACCGCCA AGCTCTACTC GGTGGAGTTC
TACGCGCTCC TGCGCCACGC CCTGTCCGAG GAGGGCCGCA TGGTCGTGCA GGCGGGTTCC
CCCTTCTTCG CTCCGGAGGC CTACTGGGGC GTGGGCGACT CCCTGGAGGC GGCGGACCTG
GCGGCCACCC CCTACAACGT GGACGTGCCG AGCTTCGGCA ACTGGGGTTT CTACCTCACC
TCATCCGGGT CCGCGCCCGA GCTGCGCGTC CCCGACGACG CGCCGCCGCT GAGCTTCCTC
GACCCGGCCC TGCTGGAGGC CGCGCAGGTC TTCCCCAAGG ACCGCCGCGA GGAGGACGTG
GAGGAGTCGA CCCTCATGCA CCCGAGGATC ATCGGCTACC ACCAGGGGGC CTGGCGGGGC
TACTGA
 
Protein sequence
MTETTVRARP RLPVSARAAR FLVLLAVFVC AACGLVYELA LVAIGSYLLG DSITQASVVL 
SVMVFAMGVG SLLSKRFQAH PAAAFAVIEG LLSLVGGLSV LLLYGAFAWF SAYQPALVVL
SFAIGLLIGM EIPLLMTLIQ RIRRQEASDA VADLFAADYV GGLIGGLAFP FLLLPLLGLP
KGALMVGALN AVVGVAVVLW LFRAELTRRA YAGLSLGLAF IIAVLGLAYA YADQFEVDAR
QALYRDPIVH AERSEYQEIV LTRSLDGQDV RLFLNGSLQF SSLDEYRYHE SLVHPAMAGP
HEDVLVLGGG DGLALREILA YDDVASATLV DLDPAVIELA STDPVISDLN GDSLEDPRVD
VVNADAFQWL RENREEFDVI IADLPDGDSV GTAKLYSVEF YALLRHALSE EGRMVVQAGS
PFFAPEAYWG VGDSLEAADL AATPYNVDVP SFGNWGFYLT SSGSAPELRV PDDAPPLSFL
DPALLEAAQV FPKDRREEDV EESTLMHPRI IGYHQGAWRG Y