Gene Ndas_5125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5125 
Symbol 
ID9249018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp278327 
End bp278998 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content71% 
IMG OID 
Productribosomal protein L4/L1e 
Protein accessionYP_003683011 
Protein GI297564038 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA TCGAGGTCAA GAACCCCGAG GGCGGCACCA AGGGCAGCGT CGAGCTGCCG 
GACACCGTCT TCGCCCAGCA GGTCAGCATC CCGCTGATCC ACCAGGTCGT GAACGCCCAG
CTCGCCGCTG GCCGTCAGGG CACGCACGCC ACCAAGACCC GCGGCGACGT CCGCGGCGGT
GGCAAGAAGC CCTACCGCCA GAAGGGCACG GGCCGGGCCC GCCAGGGTTC CATCCGCGCC
CCGCAGTACA CCGGCGGCGG CACGGTCCAC GGACCCCAGC CGCGCGACTA CAGCCAGCGC
ACCCCCAAGA AGATGAAGGC CGCCGCCCTG CGCGGAGCCC TCTCGGACCG GGCGCGCCAC
GGCCGCATCC ACGTCGTCAG CCAGTTCGTG GCCGAGGACC TGGAGAGCAA GTTCACGCAG
ACCGCTCTGA AGGCGCTGCG CCAGGTCACC GAGTCCGACA AGGTCCTGGT GGTGCTGGCC
CGCGACGACG AGCACAACCG GCGCGCCCTG CGCAACGTCG AAGAGGTGCA CATCCTCGAC
GCGGACCAGG TGAACACCTA CGACGTCCTG TACTCGGACG ACGTGGTCTT CACCGAGGCG
GGCTACGCCG AGTTCCTGGC CCACGCGGCC GGTGCCTCCA AGGCCGCGCA GTCCGAGGAG
GACGACCAGT GA
 
Protein sequence
MAQIEVKNPE GGTKGSVELP DTVFAQQVSI PLIHQVVNAQ LAAGRQGTHA TKTRGDVRGG 
GKKPYRQKGT GRARQGSIRA PQYTGGGTVH GPQPRDYSQR TPKKMKAAAL RGALSDRARH
GRIHVVSQFV AEDLESKFTQ TALKALRQVT ESDKVLVVLA RDDEHNRRAL RNVEEVHILD
ADQVNTYDVL YSDDVVFTEA GYAEFLAHAA GASKAAQSEE DDQ