Gene Ndas_5122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5122 
Symbol 
ID9249015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp275906 
End bp277099 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content66% 
IMG OID 
Producttranslation elongation factor Tu 
Protein accessionYP_003683008 
Protein GI297564035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.821409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGAAAG CAAAGTTCGA GCGGACTAAG CCGCACGTCA ACATCGGCAC CATCGGTCAC 
ATCGACCACG GCAAGACCAC GCTGACCGCG GCCATCACCA AGGTGCTGCA CGACGCGTAC
CCGGACCTGA ACCCGTTCAC GCCGTTCGAG GACATCGACA ACGCTCCTGA GGAGCGCGAG
CGCGGTATCA CCATCTCCGT CGCCCACGTC GAGTACCAGA CCGAGGCGCG TCACTACGCC
CACGTGGACT GCCCCGGTCA CGCCGACTAC GTGAAGAACA TGATCACCGG TGCGGCGCAG
ATGGACGGCG CCATCCTGGT CGTGGCCGCC ACCGACGGCC CGATGCCGCA GACCAAGGAG
CACGTGCTCC TGGCCCGCCA GGTCGGCGTG CCCTACATCG TGGTGGCCCT GAACAAGGCC
GACATGGTGG ACGACGAGGA GATCTTCGAG CTCGTCGAGC TCGAGGTCCG CGAGCTCCTC
AGCGAGTACG AGTTCCCCGG CGACGACGTC CCCGTCACCA AGGTCTCCGC GCTCAAGGCG
CTGGAGGGCG ACGAGGAGTG GGGCAAGGCC GTCCTGGAGC TCATGGGCAC CGTGGACCAG
TTCATCCCCG AGCCCGAGCG TGACACCGAG AAGCCCTTCC TCATGCCGAT CGAGGACGTC
TTCTCGATCA CCGGTCGCGG CACCGTCGTC ACCGGTCGCA TCGAGCGCGG CATCGTCAAC
GTCAACGAGA CCGTCGACAT CGTCGGTATC AAGGACGAGA AGCAGACCAC CACGGTCACC
GGTGTCGAGA TGTTCCGCAA GCTGCTCGAC CAGGGCCAGG CCGGCGACAA CGTCGGTCTG
CTCCTGCGCG GCATCAAGCG CGAGGACGTC GAGCGCGGCC AGGTCGTCAT CAAGCCCGGC
ACGACCACCC CGCACACCGA GTTCGAGGCC CAGGTCGTCA TCCTGTCCAA GGACGAGGGT
GGCCGCCACA CGCCGTTCTT CAACAACTAC CGCCCGCAGT TCTACTTCCG CACCACGGAC
GTCACCGGCG TCGTGACGCT GCCGGAGGGC ACCGAGATGG TCATGCCCGG TGACAACACC
GAGATGACCG TCCAGCTCAT CCAGCCCGTC GCGATGGAGG ACGGCCTGAA GTTCGCCATC
CGCGAGGGTG GCCGGACCGT GGGCGCGGGT CGCGTCACGA AGATCCTCAA GTAG
 
Protein sequence
MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDAY PDLNPFTPFE DIDNAPEERE 
RGITISVAHV EYQTEARHYA HVDCPGHADY VKNMITGAAQ MDGAILVVAA TDGPMPQTKE
HVLLARQVGV PYIVVALNKA DMVDDEEIFE LVELEVRELL SEYEFPGDDV PVTKVSALKA
LEGDEEWGKA VLELMGTVDQ FIPEPERDTE KPFLMPIEDV FSITGRGTVV TGRIERGIVN
VNETVDIVGI KDEKQTTTVT GVEMFRKLLD QGQAGDNVGL LLRGIKREDV ERGQVVIKPG
TTTPHTEFEA QVVILSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT
EMTVQLIQPV AMEDGLKFAI REGGRTVGAG RVTKILK