Gene Ndas_5111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5111 
Symbol 
ID9249004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp257851 
End bp258528 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content68% 
IMG OID 
Productribosomal protein L1 
Protein accessionYP_003682998 
Protein GI297564025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.253072 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.533351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCGCA GCAAGAACCA CCGCAAAGCC AGCCAGCAGG TGGACCGTGA CAAGCTCTAC 
GGCCCCGCCG AGGCCGTGAA GCTCGCCAAG GAGACCTCCA CCGTCAAGTT CGACGCGACC 
GTCGAGGTCG CCCTGCGCCT GGGCGTCGAC CCGCGCAAGG CCGACCAGAT GGTCCGCGGC 
ACCGTGAACC TGCCGAACGG CACCGGCAAG ACCGCTCGGG TCCTGGTCTT CGCGACCGGT 
GAGCGTGCCG AGCAGGCTCT CGCGGCTGGC GCCGACATCA TCGGCGACGA CGAGATGATC 
GAGAAGGTCT CGAAGGGCTT CACCGACTTC GACGCCGTCG TGGCCACCCC GGACCTCATG 
GGCAAGGTCG GCCGCCTCGG CCGCGTGCTC GGTCCGCGCG GCCTGATGCC GAACCCGAAG 
ACCGGCACCG TCACCCCCGA CGTCGCCAAG GCCGTCACCG ACATCAAGGG CGGCAAGATC 
GAGTTCCGCG TGGACCGCCA CGGGAACCTG CACTTCATCA TCGGCAAGGC CTCCTTCGAC 
GACCAGAAGC TCCTGGAGAA CTACCAGGCC GCGATCGACG AGGTGAACCG CCTCAAGCCG 
TCCGCCGCCA AGGGCCGCTA CATCAAGAAG GCCGTGGTCT CCACGTCCAT GGGCCCGAGC 
ATCCCGCTCG AGGTCTAG
 
Protein sequence
MKRSKNHRKA SQQVDRDKLY GPAEAVKLAK ETSTVKFDAT VEVALRLGVD PRKADQMVRG 
TVNLPNGTGK TARVLVFATG ERAEQALAAG ADIIGDDEMI EKVSKGFTDF DAVVATPDLM 
GKVGRLGRVL GPRGLMPNPK TGTVTPDVAK AVTDIKGGKI EFRVDRHGNL HFIIGKASFD 
DQKLLENYQA AIDEVNRLKP SAAKGRYIKK AVVSTSMGPS IPLEV