Gene Ndas_5090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5090 
Symbol 
ID9248979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp234583 
End bp235446 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content75% 
IMG OID 
Productpeptidase M48 Ste24p 
Protein accessionYP_003682977 
Protein GI297564004 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.847465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.617728 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGTCA GCGCGGCCCG CGCGGCCGGT CTGTTCGTCG GCGCCGCGGT GCTCGTCGTC 
CTGGTCGGCT GGCTGTGCGG AGCGGAGAAG GGCGCCCAGT TCTCCGTGGC CCTGGTGCTG 
TGCGCCGGCG TCCTGGTCTA CCTCTTCGGG GAGTCCCTGG CGTTGCGCGC GATGCGCGCG 
CGGCCGGTGA GCGAGATCGA GCGCCCCGAG CTGTACCGGA TCGTCCGCGA GCTGGCCACG 
GCCGCCCGGC AGCCGATGCC CCGGCTCTAT TTGTCGCCGG TGCGCTCGCC CAACGCCTTC 
GCCACCGGCA GCAGCCCGCG CCGCGCCTCC CTGTGCTGCA CCACGGGGCT GCTGCGCACG 
CTGGACGAGC GCGAGCTGCG CGGCGTGATC GCCCACGAGC TGGCGCACAT CCGCGCCAAC 
GACACGCTGA TCAGCTCGGT GGCCGCCACC CTGACCGCGG TGATCACGGC GACGACCGCC 
ATCGCCCTCC TGGTCCCGCT GGGGGACTCC GAGGAGAGCG ACATGCCCAC CCTCCTGGGC 
GGCCTGATGA CGGTCCTGCT GGCGCCGCTC GCGGCCATGG TCGTCTACTG CGGGGTGGGG 
AGACAGCGCG AGTTCCGGGC CGACGAGCAG GCCGCGCGGC TGACCGGCGA CCCGCTGGCG 
CTGGCCGACG CCCTGCGCAA GCTGGAGGTG GGCGCGCGCC GGTACCCGCT GCCCCGGGAG 
CGCAGCCTGC TGGCCTCGGC GCACCTGATG ACCACCAACC CGTTCCCGAG CGGCGTGGGC 
CGCCTGTTCG CCGCGCACCC GCCGACGGCG GAGCGCGTCC GGCGCCTACG GGAGCTGCGC 
CGCAGCTGGG ACCTGGGCCG CTGA
 
Protein sequence
MYVSAARAAG LFVGAAVLVV LVGWLCGAEK GAQFSVALVL CAGVLVYLFG ESLALRAMRA 
RPVSEIERPE LYRIVRELAT AARQPMPRLY LSPVRSPNAF ATGSSPRRAS LCCTTGLLRT 
LDERELRGVI AHELAHIRAN DTLISSVAAT LTAVITATTA IALLVPLGDS EESDMPTLLG 
GLMTVLLAPL AAMVVYCGVG RQREFRADEQ AARLTGDPLA LADALRKLEV GARRYPLPRE 
RSLLASAHLM TTNPFPSGVG RLFAAHPPTA ERVRRLRELR RSWDLGR