| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5088 |
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| Symbol | |
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| ID | 9248977 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | - |
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| Start bp | 231122 |
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| End bp | 232213 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | thiamine pyrophosphate protein domain protein TPP-binding protein |
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| Protein accession | YP_003682975 |
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| Protein GI | 297564002 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.993677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.910187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAGA ACGTGACGGG TACCGGCGCG AACGGCCACG TCCACGGGGT CCCGGAGGCC
CTGGGCGGGC TGCGCCTGGT GCCCAGGACC GACACCGCGT ACAAGATGAA GGACTTCAAG
TCCGACCAGG AGGTGCGCTG GTGCCCGGGC TGCGGCGACT ACGCGATCCT GGCCGCCTTC
CAGTCCTTCC TGCCCGAGCT GGGCGTGCCG CGCGAGAACG TGGTGATGGT GTCGGGTATC
GGCTGCTCCT CCCGATTCCC GTACTACCTG AGCACGTACG GCATGCACTC GATCCACGGG
CGCGCCCCGG CGATCGCGAC CGGGCTGGCC ACCAGCCGCC CGGACCTGTC GGTGTGGGTG
GTGACCGGTG ACGGCGACGG GTTGTCCATC GGCGGCAACC ACCTCGTCCA CGCGCTGCGC
CGCAACGTCA ACATCAACAT CCTGTTGTTC AACAACCGGA TCTACGGGCT GACCAAGGGT
CAGTACTCCC CCACCTCCGA GCCGGGCAAG ATCACCAAGT CCTCGCCGGT GGGGTCGCTG
GACCACCCGT TCAACCCGCT GTCGCTGGCG CTGGGCGCGG AGGCCACGTT CGTGGCCCGC
ACGATCGACT CCGACCGCAA GCACCTCACG TCGGTGCTGC GGGCGGCGGC CGACCACCCC
GGCGCGTCGT TCGTGGAGAT CTACCAGAAC TGCCCGATCT TCAACGACGA CGCGTTCGAG
CCGCTGAAGG ACCCGGCGGC GCGGGACGTC CGGCTGCTGC GCCTGGAGCA CGGCGAGCCG
CTGCGGCTGG GCCCGGACCG GGGCGTGGTC GCCGGGGAGT TCGGCGGCTT GGAGGTCGTG
GACGTGGACT CGGTGGGAGA GGACCGGCTG CTGCGGCACG ACGCGCACCG GGAGGACCCG
GGGTACGCGT TCGCGCTGTC GCGCCTGGAC CAGCCCGCGT TCGAGCACGT GCCGATCGGG
GTGCTGCGGG ACGTGCGCCG CCCGGCCTAC GACGAGCTGG TGAACGAGCA GGTGGCCGAC
GCGCGGGCCG AGCGCGGCGC CGGCGAGCTG GCCGCCCTTC TGGCCAGCGG GGACACCTGG
AGGGTGGAGT AG
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| Protein sequence | MTENVTGTGA NGHVHGVPEA LGGLRLVPRT DTAYKMKDFK SDQEVRWCPG CGDYAILAAF
QSFLPELGVP RENVVMVSGI GCSSRFPYYL STYGMHSIHG RAPAIATGLA TSRPDLSVWV
VTGDGDGLSI GGNHLVHALR RNVNINILLF NNRIYGLTKG QYSPTSEPGK ITKSSPVGSL
DHPFNPLSLA LGAEATFVAR TIDSDRKHLT SVLRAAADHP GASFVEIYQN CPIFNDDAFE
PLKDPAARDV RLLRLEHGEP LRLGPDRGVV AGEFGGLEVV DVDSVGEDRL LRHDAHREDP
GYAFALSRLD QPAFEHVPIG VLRDVRRPAY DELVNEQVAD ARAERGAGEL AALLASGDTW
RVE
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