Gene Ndas_5087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5087 
Symbol 
ID9248976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp230282 
End bp230950 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content73% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003682974 
Protein GI297564001 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.81673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATCG TCATCGCCGG AGGACACGGG AAGATCGCGC TGCGGCTGGC CAGGCAGCTG 
GCCGACCGAG GTGACGAGCC CGTCGCCCTC ATCCGCAACC CGGACCACAC CCAGGACGTC
GTCGACGCCG GTGCCGAACC GGTCGTGATC GACCTGGAGA AGGCCACCGT CACCGAGCTG
ACGGAGAAAC TCATGAACGC GGACGCCGTC GTGTTCGCCG CGGGCGCGGG CCCGGGCAGC
GGCGCCGCCC GCAAGGCGAC CGTCGACCAC AAGGCCGCCG TGCTGACCGC CGACGCGGCC
TCCCTGGCGG GCACGCGCCG CCTGGTCCAG GTGTCGGCCA TCGGCGTGGA CGAACCCGTG
CCGGAGGGCA CCGACGAGAC GTGGGCGGCG TACGTGGAGG CCAAGCGGGC CGCCGACGCC
GACCTGCGCG AGCGCGACCT GGAGCTGGAC TGGACGATCC TGCGCCCGGG CCGGCTGACC
GACGACCCGG GCACCGGCAG GGTGGAGCTG GGCGGGGAGG TCGAGCGCGA CGCGGTGACC
CGTGACGACG TGGCCTCGGT GATCGTCGCC CTTCTGGACG AACCGGGAAC GGTCGGCAGG
GTTCTCAACC TGGTGAACGG GGAGACACCC GTCGCCGAGG CCGTCCGCGC CGCTGCCGCC
TCCTCCTGA
 
Protein sequence
MRIVIAGGHG KIALRLARQL ADRGDEPVAL IRNPDHTQDV VDAGAEPVVI DLEKATVTEL 
TEKLMNADAV VFAAGAGPGS GAARKATVDH KAAVLTADAA SLAGTRRLVQ VSAIGVDEPV
PEGTDETWAA YVEAKRAADA DLRERDLELD WTILRPGRLT DDPGTGRVEL GGEVERDAVT
RDDVASVIVA LLDEPGTVGR VLNLVNGETP VAEAVRAAAA SS