| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5082 |
|---|
| Symbol | |
|---|
| ID | 9248971 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | - |
|---|
| Start bp | 227041 |
|---|
| End bp | 227949 |
|---|
| Gene Length | 909 bp |
|---|
| Protein Length | 302 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003682969 |
|---|
| Protein GI | 297563996 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.806139 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.638796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG ATGTCTTCGA AGAGCACCGC TCCCTGCTGA CCGGTGTCGC CTACCGCATC
CTCGGCAGCG CCTCCGACGC GGAGGACGCC GTCCAGGAGG CCTGGCTGCG CTGGTCCTCC
GTCGATCCGG CCGCGGTGGA GGACCCGCGC GCCTACCTGG TCACCGTCAC CTCCCGGCTG
GCCATCGACC GGCTGCGCAG CGTCCGGTCC CGGCGGGAGT CCTACGTGGG CGACTGGCTG
CCCGAACCGG TCAGCGACGT CCCCGGCGGG GCCGAGCACG CCGAACTCGC GGACTCGGTG
GAGTTCGCGC TGCTGGTGGT CCTGGAGACC CTCAGCCCGC TGGAGCGCGC CGTCTTCGTA
CTGCGCGAGG CCTTCCAGAT GCCCTACGCC GAGATCGGCG CGGTGATCAG CCGGGAGGAG
GCCGCCACCC GCCAGCTCGC CCGGCGGGCG CGCGAGCACG TACGCGACAG GCGCCCGCGG
TTCGAGGCCG ACCGGGCCGT GCGGCGGCGG ATCACCGAGC GCTTCCTGGG AGCCTGCCTG
GAGGGTGACC TGGAGGGGTT GACCGGCCTG CTGGCCGACG ACGTCACGCT GGTCAGCGAC
AGCGGCGGCC GGACCAGGGC GCCCCACCGG ATCCTGGAGG GCGCGGCGAG GGTCGGCCGG
TTCCTGTCCG TGCTGGCGCG GCCGCGCAAC GCGGAGCGCT TCCTCGTCTC CGCGGGCCTG
GACGGCACGG AGGAGCCTCG GTCGGCGGTC ACCGAGGTCA ACGGCGGACC GGCGGCGGTC
GTCTCCGTCG GGGACAGGGT GGTCGCGCTG CTGTCCCTGG ACATCACCGC CGAGGGCCGT
GTGCGGCACG TGTACCTCGT GGCCAATCCC GACAAGATGT CACGTCTGCG GGCGCCCGAA
CCGTCCTAG
|
|---|
| Protein sequence | MTTDVFEEHR SLLTGVAYRI LGSASDAEDA VQEAWLRWSS VDPAAVEDPR AYLVTVTSRL
AIDRLRSVRS RRESYVGDWL PEPVSDVPGG AEHAELADSV EFALLVVLET LSPLERAVFV
LREAFQMPYA EIGAVISREE AATRQLARRA REHVRDRRPR FEADRAVRRR ITERFLGACL
EGDLEGLTGL LADDVTLVSD SGGRTRAPHR ILEGAARVGR FLSVLARPRN AERFLVSAGL
DGTEEPRSAV TEVNGGPAAV VSVGDRVVAL LSLDITAEGR VRHVYLVANP DKMSRLRAPE
PS
|
|---|
| |