Gene Ndas_5078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5078 
Symbol 
ID9248967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp223932 
End bp224618 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content75% 
IMG OID 
Productresponse regulator receiver and unknown domain protein 
Protein accessionYP_003682965 
Protein GI297563992 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.763511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTG TGCTGGTCGT GGACGACGAC GTGCGGGTGG CGCGCAACCA CCAGGAGCTG 
GTGGAGTCGC TGCCCGGGTT CACCGTGGCG GGGGTCGCGC ACACGGCCGC CGCCGCCCTC
ACCCAGATCC GGGGGCACCA GCCCGACCTG GTGCTGCTCG ACCTGCACCT GCCCGACGCC
TCAGGGATCT CGGTGATGCG CGCCCTGCGC GCCGCCGCCA CCAGCGCCGC GCCCCAGCGG
ACGGACTTCC TGATGATCAC CGCCGTGCGC GACATCGGCC AGGTGCGCTC GGCCATGCAC
GGCGGGGCGG TCCACTACCT GCTCAAGCCG TTCCCGCTCA GCGTGCTGCG CGACCAGCTG
GAGCGCTACG CCGTGGCGCG CCGGAGGATG GACGCCGACG GGGAGGCCAC CCAGCAGGAG
GTGGACCGGC TGTTCGGGCT GCTGCGCCCG GCCGGGGGCC GATCGCTGCC CAAGGGGCTG
ACCCCGACCA CCGTGGACCT GGTGGCGGGA GTGCTGCGGG AGGCGGAGGG GGACGTGTCG
GCCTCGGAGG TGGCCGAGCG CGCCGGGGTG TCCCGGGTGA CCGCGCGCCG CTACCTGGAA
CACCTGTGCG CGGTCGGCCG GGCCGAGCTG CGCATGCGCT ACGGCTCGAC GGGGCGCCCC
GAACACCTCT ACCGCTGGAC GGCCTGA
 
Protein sequence
MIRVLVVDDD VRVARNHQEL VESLPGFTVA GVAHTAAAAL TQIRGHQPDL VLLDLHLPDA 
SGISVMRALR AAATSAAPQR TDFLMITAVR DIGQVRSAMH GGAVHYLLKP FPLSVLRDQL
ERYAVARRRM DADGEATQQE VDRLFGLLRP AGGRSLPKGL TPTTVDLVAG VLREAEGDVS
ASEVAERAGV SRVTARRYLE HLCAVGRAEL RMRYGSTGRP EHLYRWTA