Gene Ndas_5072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5072 
Symbol 
ID9248961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp216450 
End bp217289 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content67% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003682959 
Protein GI297563986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAGA CACGCGGGTT CCGCTGGTTC CGGCGGATCG TCCTGACCTT CCTCACCGTG 
TTCACGGTGC TGCCCCTGTA CGTGCTGGTG GTGACCTCGG TGAAGCCGCT GGAGAACGTC
CGGGGGATGT TCACCTGGCT TCCGGACCGC GTCACCCTCC AGCCGTACGT GGACATGTGG
ACGACGATCC CGTTGGCCCG CTACCTCACC AACAGCCTGA TCGTCACGAC CACGGCGACG
GCCCTGGCAC TGGTGGTGGC GGTGCTGGCC GCCTATCCGC TGTCACGGCT GCGCTTTCGC
GGCAGGCGGC TGTTCAGCAT GACGGTGCTC TCGACGCAGA TGTTCCCCGG CATCCTGTTC
CTGCTGCCGC TCTTCCTGAT CTTCGTGCGG CTGGAGGACC TCACCGGCAT CGAGTTCACC
GGCTCCTACA CCGGGCTGAT CATCACCTAT CTGACCTTCG CCCTGCCGTT CTCGATCTGG
ATGCTGGCCG GGTACTTCAG CGCCATCCCC GAGGGCCTGG AGGAGGCGGC GATGATCGAC
GGCACCGGCA GGATCGGCGC CCTGGTGCGG GTCATCCTCC CCGTGGCCCG CCCGGGCATC
CTCGCCGTCG GGGTGTTCGC GTTCATCACC GCCTGGGGGG AGGTGCTGTT CGCCTCGGTG
CTCACCGACA CCGAGACCCG CACCCTCTCC ATCGGGCTGG AGCTCTACAC CAGCCAGACC
GACACCCTGT GGAACGAGCT GCTGGCCGCG TCGGTGACCG TCTCCCTGCC GGTGGTCGTG
GCCTTCATGC TGGTGCAGCG CTACCTCGTG TCCGGGCTGT CGGCGGGCGC GGTGAAGTAG
 
Protein sequence
MHETRGFRWF RRIVLTFLTV FTVLPLYVLV VTSVKPLENV RGMFTWLPDR VTLQPYVDMW 
TTIPLARYLT NSLIVTTTAT ALALVVAVLA AYPLSRLRFR GRRLFSMTVL STQMFPGILF
LLPLFLIFVR LEDLTGIEFT GSYTGLIITY LTFALPFSIW MLAGYFSAIP EGLEEAAMID
GTGRIGALVR VILPVARPGI LAVGVFAFIT AWGEVLFASV LTDTETRTLS IGLELYTSQT
DTLWNELLAA SVTVSLPVVV AFMLVQRYLV SGLSAGAVK