| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5066 |
|---|
| Symbol | |
|---|
| ID | 9248955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 208702 |
|---|
| End bp | 210354 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | proton-translocating NADH-quinone oxidoreductase, chain N |
|---|
| Protein accession | YP_003682953 |
|---|
| Protein GI | 297563980 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.146495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCCCCC ACATGGACCT TCCCGTCATC ACCGAGGCGG CGCCGCAGAT GGACTGGTGG
CTGCTCGCGC CGCTGCTCAC GGTGTTCGCC GCCGGTGTTC TGGGCGTGCT GTTCGAGGCG
TTCGTCCCCC AGGGGCGGCG CCGCGCCATC CAGATCGGGC TCGCGGCGCT CGCGCTGCTG
GCCGCGTTCG TCCTGCTGGT GCTCCAGGTG GGCTCGCTGC CCGAGGACGC GCCGGGGGTG
ACGGTCGGCG CCGGGGCGCT GGCGGTGGAC CGGACGGTGA TCTTCTTCCA GGGCACCATC
ACCGTGCTCG CGCTGGTGAG CCTGCTGCTG ATCTCCGAGC GCCGGGACGG GCGCGACGCG
TTCGCCGCGC AGGCGGCGAC GGTGCCCGGG AGCGAGGAGG AGCGCGCGCA CATCCTGGCG
GGCTCCCAGC ACACCGAGGT GTACCCGCTG GTGATGTTCG CGGTGCTGGG GATGCTGATG
TTCCCGGCCT CGAACGACTT CCTGACGATG TTCATCGCGC TGGAGGTCAT GAGCCTGCCG
CTGTACCTGC TGTGCGGGCT GGCCCGGCGC CGCCGCCTGT TCTCGCAGGA GGCCGCGGTC
AAGTACTTCC TGCTGGGCGC GTTCTCCTCG GCGTTCTTCC TGTTCGGCGC CGCCATGGTC
TACGGCTACG CGGGCTCGGT GAACTTCGGC GAGATCCGCG CGGCCGTCGA GGCGGGCGGC
GCGGACGTCT TCCAGGGCGG AGACGGCGAG CCGCTGCTGC TCATGGGCAT CGGCCTGGTG
GCGATCGGCC TGCTGTTCAA GGTCGGCGCG GTGCCCTTCC ACAACTGGAA GCCGGACGTG
TACCAGGGCG CGCCGACCCC GATCACGGCG CTGATGGCCT CCTGCACGCT GGTCGCCGCG
TTCGGCGCCC TGCTGCGGGT GTTCTTCGTG CCCTTCGGCG GCTCGGCCCA GACCTGGGAG
CCGATGCTGT GGGCGGTGGC CGTCCTGACG ATGGTCGTGG CCGCGGTCAT CGCGGTGACC
CAGCGCGACG TCAAGCGGCT GCTGGCCTAC TCGTCGGTGG TGCACGCCGG GTTCATCCTG
ACCGCCGTCG TGGCGGGCAG CACGGACGGG CTCGCGGGCG CCATGTTCTA CCTGGCGGCC
TACGGGTTCA CCACGCTGGG CGCGTTCGCC GTGGTGACGC TGGTGCGGAC CAAGGACGGC
GGCCAGGAGC TGGGCGACCT GGACCGGTGG GCGGGGCTGG GCCGCCGCTC GCCGGTGCTG
GCCGGGGCGC TGGCGCTGTT CCTGCTGGCG TTCGCCGGGA TCCCGCTCAC GAGCGGCTTC
ATCGGCAAGT TCGCGGTGTT CGAGGCGGCG GTGGCCGCCG GCGCCGTCCC GCTGGTCGTG
GTCGGTGTGC TGAGCAGCGC GGTGACCGCG TTCTTCTACG TGCGGATCAT CGTGGTGATG
TTCTTCCGGG ACCCGGAGGG CGAGGGCCCC ACGGTGGTGC GCGCGGGCGC GGCCACGGGC
GGGGTCATCG CGATCGGGGT GGCGGCGACG CTGCTGCTCG GCGTGTACCC GGGGGCGGTG
CTCGACAACC TGCTGCCCCC GGCCGACGCC GACCAGGCCC CGACCTCGGT GATGGTCGAA
CAGGCGTCGA CGCAGGCCGG AGGCGCGGAG TGA
|
|---|
| Protein sequence | MIPHMDLPVI TEAAPQMDWW LLAPLLTVFA AGVLGVLFEA FVPQGRRRAI QIGLAALALL
AAFVLLVLQV GSLPEDAPGV TVGAGALAVD RTVIFFQGTI TVLALVSLLL ISERRDGRDA
FAAQAATVPG SEEERAHILA GSQHTEVYPL VMFAVLGMLM FPASNDFLTM FIALEVMSLP
LYLLCGLARR RRLFSQEAAV KYFLLGAFSS AFFLFGAAMV YGYAGSVNFG EIRAAVEAGG
ADVFQGGDGE PLLLMGIGLV AIGLLFKVGA VPFHNWKPDV YQGAPTPITA LMASCTLVAA
FGALLRVFFV PFGGSAQTWE PMLWAVAVLT MVVAAVIAVT QRDVKRLLAY SSVVHAGFIL
TAVVAGSTDG LAGAMFYLAA YGFTTLGAFA VVTLVRTKDG GQELGDLDRW AGLGRRSPVL
AGALALFLLA FAGIPLTSGF IGKFAVFEAA VAAGAVPLVV VGVLSSAVTA FFYVRIIVVM
FFRDPEGEGP TVVRAGAATG GVIAIGVAAT LLLGVYPGAV LDNLLPPADA DQAPTSVMVE
QASTQAGGAE
|
|---|
| |