Gene Ndas_5047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5047 
Symbol 
ID9248936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp186495 
End bp186962 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content58% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003682934 
Protein GI297563961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00326281 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.22212 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAACC ATCACTTCCA AAGAGGCCAT CTAACCCCAG ATGAGCAACA GGATATCCTG 
ACGCAAATCG GGGCACGGAT CCTTGACCAA GCCCCCGACG GATGGGCAAA GATCGTCTAC 
ACCAGGAAAT CCGTTATCGA ACAGTCTACG AGCACCCTCG TCGTTGAATT CGAGGACGGA 
ACCAGTCAGA GGGAGTCCGT TCCGAGCGGC ATGGGTCTGA TGATCGACGA CCTCAGGGCG 
GGGATGTACC AGGAGGGCAA GGGCACCTGG TTCTCCTTCG AGTACGTCAT CACCCCGCCC 
GGCAGGTTCA ACGTCACCTA CAACTACGAC GAGGACCCCG GCATCACCTT CCCCACCGCC 
TTCGGCTACA CCAACGACCT CAAGTACTTC CCGCGCGACG AGGAGTACAT GACCGACTGG 
CTTCGCGAGA AACTCCAGGA AGAGGCCGAG GGTCGGGCAA TGGAATAA
 
Protein sequence
MVNHHFQRGH LTPDEQQDIL TQIGARILDQ APDGWAKIVY TRKSVIEQST STLVVEFEDG 
TSQRESVPSG MGLMIDDLRA GMYQEGKGTW FSFEYVITPP GRFNVTYNYD EDPGITFPTA 
FGYTNDLKYF PRDEEYMTDW LREKLQEEAE GRAME