Gene Ndas_5046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_5046 
Symbol 
ID9248935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand- 
Start bp185468 
End bp186349 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003682933 
Protein GI297563960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.00772514 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.237917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCT ATATCTCCCG ACACTGCATC GAACACGGTG TCAACCAGCA GTTCCTCAAC 
CTCAAGATCG AGGGAAACAC GCAGCAGATC CGGAACTTGG AGCAGGACTG CTCCAACATT 
GACCTGTCTC TCACACCGGC CTACCGAGTC GCTGAGCTCT CTCTCCTGCT GGAGCCCACA 
GCTGCGACGG TGGAGACTTG GGAAGCGTGG ACCAAGGCGA TGCAGCTCCA CGGCGCTGTC 
TTCGCCGTCT CCGAGGCGGA GGAGGGGACA CAGGTCGCGT ACCTGATCGA CCATGAGGTC 
CGTGCGCTCA CTGCGCCCGG GATGCTCCAC TGCGCCGACC CTGCCACGTG GGAGAAGGCG 
TTCTACCTGG CGGTCGTCTG CCGCGACAAC GCCCGCGCCG ACGCCCTGTG CCGCGTCCCC 
GTGGAACACC TGCGCCGCGC GGCCGAGGGC GCAAAGGTGC GGTACAACGA GTACAGCTAC 
CACTGGATCG CCGCCCTCCA GGCCTACGTC AACGGCACCG ATGACCTGGT CCGTGAACTG 
CGGTCGGCCA TGGAACTGTC CTCTCCCCGC AGTGGCGCCT TCGGCGGCGA AGCCCTTGAT 
CTGCTGATCT TCCCGAAGAT GGAGGTCTTC CGCCGTCTGC TGATGGGAGA CTCCACCAAG 
TTCAACGAAA CGCTCGTCTT CGCTCTGGAG GGCTTCAAGA GCTACCACAC CCGCGAGGAC 
GCCCCGCCCG GGGCCCAGGG CATCGTTCCG CTCGGGCTGC TGGCGTGGGC CTGCCTGGCT 
TACGACAAGT CCCAACGCGG CGACTTCTCC CTCGACGTGG AGTCGGAGTA CCTGCCCAAA 
CACCTCGTAC AGCGATCCTG GTACGGCGAG TTCCCCGTCT AA
 
Protein sequence
MTTYISRHCI EHGVNQQFLN LKIEGNTQQI RNLEQDCSNI DLSLTPAYRV AELSLLLEPT 
AATVETWEAW TKAMQLHGAV FAVSEAEEGT QVAYLIDHEV RALTAPGMLH CADPATWEKA 
FYLAVVCRDN ARADALCRVP VEHLRRAAEG AKVRYNEYSY HWIAALQAYV NGTDDLVREL 
RSAMELSSPR SGAFGGEALD LLIFPKMEVF RRLLMGDSTK FNETLVFALE GFKSYHTRED 
APPGAQGIVP LGLLAWACLA YDKSQRGDFS LDVESEYLPK HLVQRSWYGE FPV