| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_5002 |
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| Symbol | |
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| ID | 9248891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014211 |
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| Strand | + |
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| Start bp | 143504 |
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| End bp | 144442 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003682889 |
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| Protein GI | 297563916 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0821356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCCTA TCCAGGTCCC AGACGCGCCC GTCGTCCTGT CGTCGGCGTC GGTCTACCCG
GAGAAGACCC CGGCCGCCTT CGAGATCGCC GCGAAGCTGG GGTACGACGG CGTGGAGGTG
CTCGTCTCCT CCGATCCGGC AAGCCAGGAC ATCGACCTCC TACGGCGCCT CTCGGACTAC
CACCAGATCC CCGTCACCGC GGTCCACTCA CCCTGCCTGG TCCTGACCCA GCGGGTGTGG
GGCAGGGAGC CCTGGGGCAA ACTCGTCCGC TCCAAGGAGA TGGCCGAGGC CCTGGGCGCC
AAGACGATCG TGGTGCACCC CGCCTTCCGA TGGCAGCGCG ACTACGCCCG CGAGTTCGAG
ACCGGTATCT CCCGCATGCA GGACGAGACC GACGTCGTCT TCGCCGTGGA GAACATGTAC
CCGGTGCGCG TGCGCGACCG CGAGGTCGTC CCCTACGCGC CGAGCTGGAA CCCGCTCGAC
CGCGACTACC CCGACGTCAC GCTCGACCTG TCGCACACCG CCATGTCCGG CTCCGACGCC
ATGGACATGG CCAAGCGCCT GGGCGACCGC CTCTCCCACA TCCACGTGGC CGACGGCATC
GGCGGCCAGA ACCTCGACGA GCACCTCATC CCCGGGCGCG GACGCCAGCC GGTGGGCGAA
CTGCTGGAGT ACCTGGCCGG GAACGGCTTC GAGGGCCAGC TGGTCCTTGA GGTCAGCACC
CGCAAGGCCC CCGACCGCCA GGCGCGCATG CGCGAGCTGG CCGAGGCCCT GGCCTTCACC
CGGCTGCACT TCGCCCGCAC CGCGGGCCCC GGCGACCGGC CGCGCGACCG CCGCGAGCGC
ATCGCGCTGC TGCGCCGCGC CCCCTCGGCG CCGCCCCGCC GCTTCGCGGT CGACGAGGGC
GGCACCGTGG ACGACAAGGG CACCGTCGAC CCCGAGTGA
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| Protein sequence | MSPIQVPDAP VVLSSASVYP EKTPAAFEIA AKLGYDGVEV LVSSDPASQD IDLLRRLSDY
HQIPVTAVHS PCLVLTQRVW GREPWGKLVR SKEMAEALGA KTIVVHPAFR WQRDYAREFE
TGISRMQDET DVVFAVENMY PVRVRDREVV PYAPSWNPLD RDYPDVTLDL SHTAMSGSDA
MDMAKRLGDR LSHIHVADGI GGQNLDEHLI PGRGRQPVGE LLEYLAGNGF EGQLVLEVST
RKAPDRQARM RELAEALAFT RLHFARTAGP GDRPRDRRER IALLRRAPSA PPRRFAVDEG
GTVDDKGTVD PE
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