Gene Ndas_4983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4983 
Symbol 
ID9248872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp124769 
End bp125551 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional acitvator, Baf family 
Protein accessionYP_003682871 
Protein GI297563898 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.442209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.98893 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTCG CGATCGACGT CGGCAACTCC GAGACGGTCT TCGGTCTCTT CGCATCCGAC 
GACCTTCTCG AACACTGGAG GGTGGGAACC GACACCAGGC GCACGGCCGA CGAGTGGGCC
GTGGTCCTGC GCGGGCTCGT CGACGGCAGC AGCCTGGGCC GCCCCGAGGA CATCGACGGC
ATCGCCCTGT GCTGCTCGGT CCCGTCGGTC CAACACGAGA TGCGGGACAT GTTCCGCCGC
CACTTCGGGG ACGTCCCGGC CGTGATCGTC GAACCCGGCG TCAAGACCGG GGTGCCGATC
CGGATGGACA ACCCCAAGGA GGTGGGCAGC GACCGGATCA TCAACGCGCT GGCCGCCAAC
CACCTCTACG GCGGCCCCGC GGTGGTGGTG GACTTCGGGA CCGCGACCAC CTTCGACGCG
GTCAGCGCGC GCGGAGAGTA CGTGGGCGGG GCCATCGCCC CGGGCATCGA CATCTCCGTG
GACGCCCTCT CACGGCGAGG CGCCCAGCTG CACATGGTGG AGATCGTCAA GCCGCGCGCG
GCCATCGCCA AGAACACCAC CGAGGCGCTG CGCTCGGGGA TCGTGTTCGG GTTCGCGGGC
CAGGTGGACG GGATCGTGGA CCGCATGGTC GCCGAGCTCA CCGACGCGCC CGACGACGTG
ACCGTGGTGG CCACCGGGGG GCTCGCCTCC ATCGTGGTGG CCGAGTGCGA GACGGTCGAC
CTGCACGAGC CGTGGCTGAC CCTCATCGGC CTGCGTCTGG TCTACGAGCG CAACGTCGGC
TGA
 
Protein sequence
MLLAIDVGNS ETVFGLFASD DLLEHWRVGT DTRRTADEWA VVLRGLVDGS SLGRPEDIDG 
IALCCSVPSV QHEMRDMFRR HFGDVPAVIV EPGVKTGVPI RMDNPKEVGS DRIINALAAN
HLYGGPAVVV DFGTATTFDA VSARGEYVGG AIAPGIDISV DALSRRGAQL HMVEIVKPRA
AIAKNTTEAL RSGIVFGFAG QVDGIVDRMV AELTDAPDDV TVVATGGLAS IVVAECETVD
LHEPWLTLIG LRLVYERNVG