Gene Ndas_4980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4980 
Symbol 
ID9248869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp120178 
End bp121062 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content75% 
IMG OID 
ProductPutative oxidoreductase/dehydrogenase, Rossmann-like domain protein 
Protein accessionYP_003682868 
Protein GI297563895 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0411301 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.921394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACGA CGCAGGGACG CCCCGCCCGC CTGCGGATCG GCGTCATCGG ATCCGGCCGG 
GTCGGCTCCG TCCTCGGACA GGCCCTCGGC CGGGCCGGGC ACAAGGTCGT CGCCGCCTCC
GCGGTCTCCG ACGCCTCCCG TGCCCGCGTC GCCGACCGCC TGCCCACCGC GCGCGTGCTC
GAACCGGCTC AGGTCGCCGA GGCCAGCGAC CTCGTCCTGC TCACCGTCCC CGACGACGCC
CTTCCCGAAC TCGTCGAGGG GCTCGCCTCC ACCGGCACCG ACCTGCGCGG CAAGATCCTC
GTCCACGCCA GCGGCGCCCA CGGCTACGGT GTCCTGGCCC CCGCCACCCT CGTCGGCGCG
CTGCCCCTCG CGCTCCACCC CGCCATGACC TTCACCGGGC GCGACGAGGA CGTCGACCGC
CTCGCCAACT GCGCGTTCGG CGTCACCGCG CCCGAGCAGC TGCGCCCCAT CGCCGAGGCC
CTCGTCGTCG AGATGGGAGC CGAACCCGTG TGGATCACCG AGGACAAGCG CACCCTCTAC
CACGCGGCCC TCGCCGGGGG CGCCAACCAC CTGGTCACCC TGGTCTCCGA CAGCGCCGCC
CTGCTCGCCT CCGCCGGGGT CCCCGAACCC GGCCGCATGC TCGCGCCCAT GCTCAGCGCG
GCCCTGGACA ACGCCCTGCG GCTGGGCATC CACGGGCTCA GCGGCCCCGT CCTGCGCGGC
GACGCCGGAA CCGTCGCCGG GCACATCGAG CAGCTGCGGG AGAACGCCCC CGAGAGCGTG
GCCAGCTACG TCGAACTCGC CCGGCTCACC GCCGACCGCG CCATCAACGC CGGAATGCTC
AAGCCCGAGG ACGCCGCGCG CCTGCTCGAC GTCCTCCGCC GCTGA
 
Protein sequence
METTQGRPAR LRIGVIGSGR VGSVLGQALG RAGHKVVAAS AVSDASRARV ADRLPTARVL 
EPAQVAEASD LVLLTVPDDA LPELVEGLAS TGTDLRGKIL VHASGAHGYG VLAPATLVGA
LPLALHPAMT FTGRDEDVDR LANCAFGVTA PEQLRPIAEA LVVEMGAEPV WITEDKRTLY
HAALAGGANH LVTLVSDSAA LLASAGVPEP GRMLAPMLSA ALDNALRLGI HGLSGPVLRG
DAGTVAGHIE QLRENAPESV ASYVELARLT ADRAINAGML KPEDAARLLD VLRR