Gene Ndas_4966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4966 
Symbol 
ID9248855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp106286 
End bp107653 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID 
ProductD-alanyl-D-alaninecarboxypeptidase/D-alanyl-D- alanine-endopeptidase 
Protein accessionYP_003682854 
Protein GI297563881 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.203016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGACGGG TACGAGGCGA GGCGCTCCTC GCGCTGGCCC TGCTCAACAT ATTCGTGCTG 
ATTGCCGGGT TTGTCGCCCT CGACGTGATC GGGGCGCGGC CCCTTCCCGC GGCGCCCAAC
CCGGTCACGG ACGCCGAGGG CGTGGCGGCG GCGCAACCCG CGGCCTCGAC TCCGGCGGAC
CCGGAACGGA TCGCGGACAT CCTCGATGAT CCCATGTCGG ATTCCGGGAT CGAGGAGGGC
CTCTCCGGTT TCGTCGTGGA CGCCGCCACC GGTGAGACGC TCTTCGAGCT GGACCCGGAC
GCCCCCGTGA CCCCGGCCTC GACCACGAAA ATCGCCACGG CCGTCGCCGT ACTGGACGCA
GTCGGACCCG ACCACGTGCT GAGCACCGAG GCCTACCTGG TTCCCGGACA GGACCGCGTG
GTGCTGCGCG GAGAGGGCGA CGTCACCCTG ACCACGACCG CCGACTCCGC AGCTTACCCG
CAGGTAGCGA CCCTGAAGGA GCTGGCCGAG CGCACGGCGC GGGCCCTTGG CGCGGAGGGC
GTCGACACGG TCTCCCTCGG CTACGACGAC TCGCTGTTCA CCGGTCTGGA CAGCGGCCCC
GGCTGGAAGC CCAACTACGT CACCGAGGGC AGCACCGCCA CGGTGCACGC GCTGATGATC
GACTCCGGGA GGTTCTCCCC CGAGGCCAGC GGCTACGGGT CGCGCGTGCC GGACCCGCCC
CTGTTCGCCG CCGAGGCCTT CGCCGAACAA CTGGAGGAGG CGGGGATCAC GGTCGAGGGC
TCGCCCACCG AGGAGCGGGC CTCCGGAGAG CCCGTCGCCA GCGTCGACTC GCCCCCGATG
TCGGCGCTGG TCGAGCACAT GATGCTGGCC AGCGACAACA ACATGGCCGA GGCGCTGGGG
CGGGTCACCG CGATCGCCCT GGACGGGGAG CCCTCCTTCG ACGGCGCCGC GGCGGCCACC
CACCAGGTGA TGGAGGGCCT GGGCGTGCAG GGCGTGCGGC TGTCGGACAA CAGCGGCCTG
AGCACCGAGA ACAGGATCAC ACCGCGGGCC CTGGTGGAGC TGCTGCGGTT GGCCGCGAGC
GACGACCGCC CCGACCTCAA CGCCGCCATC ACCGGGCTGC CCACGGCCAA CTCCACGGGC
ACCCTGGCCA GCGGGGGCCG CTACTCGGCC TACTCCGCGG CGCACGAGGG CGCGGGGCTG
GTGCGCGGCA AGACCGGCAC CCTGAACGGG GTGAGCACCC TGGCCGGGAC CGTCCACGAC
CAGGAGGGCA ACCTGTTCCT GTTCGCCTTC ATGGCCAACC ACCCCCAGGC AGTGGGCTCC
CGCCTGGACC CCCTGGCCTC CGCGCTCAGC CAGTGCGGCT GCTCCTGA
 
Protein sequence
MRRVRGEALL ALALLNIFVL IAGFVALDVI GARPLPAAPN PVTDAEGVAA AQPAASTPAD 
PERIADILDD PMSDSGIEEG LSGFVVDAAT GETLFELDPD APVTPASTTK IATAVAVLDA
VGPDHVLSTE AYLVPGQDRV VLRGEGDVTL TTTADSAAYP QVATLKELAE RTARALGAEG
VDTVSLGYDD SLFTGLDSGP GWKPNYVTEG STATVHALMI DSGRFSPEAS GYGSRVPDPP
LFAAEAFAEQ LEEAGITVEG SPTEERASGE PVASVDSPPM SALVEHMMLA SDNNMAEALG
RVTAIALDGE PSFDGAAAAT HQVMEGLGVQ GVRLSDNSGL STENRITPRA LVELLRLAAS
DDRPDLNAAI TGLPTANSTG TLASGGRYSA YSAAHEGAGL VRGKTGTLNG VSTLAGTVHD
QEGNLFLFAF MANHPQAVGS RLDPLASALS QCGCS