Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4951 |
Symbol | |
ID | 9248839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | + |
Start bp | 89668 |
End bp | 90384 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | LPXTG-motif cell wall anchor domain protein |
Protein accession | YP_003682839 |
Protein GI | 297563866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACC ACACGCACGC CCGTATCGCC GCACTGGTGG CCGCGGGATT CTTCACCGCC GCCGGCGCCG GAGTGGCCTA CGCCGACACC ACGGCCACGA CCAGCGGAAA CGGCTCCATC CTCGGCGGCA ACCAGATCGT GGCCGACCTG GACGCCCCCG TCAACGTCTG CGGTAACTCG ATCGCCGTCC TCGGCCTCGC GGGCGCCCAG TGCACCGACA GCGGGGCCGT GGTGGAGGAC GACAGCTCCA CCTGGACGCC CGAGAAGCCC GAGGAGCCCG AGACCCCCGA CGAGTCCGAG AAGCCGGAGA CCCCGGAGAA GCCCGAGAAC CCCGAGAAGC CGGAGAAGCC CGGCTACGGG GGGGAGCCCG GTGACGGCGG CCACGACGGC GGCGGTCACG ACGGCGGTGG CCACGACGGC GGTCACGACG ACGGCTACGG CGGTGGTGAC CACGGCGGCG GCGGTGGCGG TGGCGGCCAC CACGGCGGCG GCGGTGGCGG CGACCACGGC GGCGGCAACG GCGGCGGTGG CGGCGGCACG CCCGAGCAGC CCGTCTCCCC GCCCGCCACG GACGAGGAGC CCCCGGCGCC CGCCCCGGAA CTCGCCCGGA CCGGCACCGA CGGCAGCGCC CTGAGCGGTC TGTTCGCCAG CGCCGCCGCC GCGATCGCCG CGGGCGCCGG ACTGCTCCTG TTCGGCAGGC GCCGCGCCCG CGCCTGA
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Protein sequence | MTYHTHARIA ALVAAGFFTA AGAGVAYADT TATTSGNGSI LGGNQIVADL DAPVNVCGNS IAVLGLAGAQ CTDSGAVVED DSSTWTPEKP EEPETPDESE KPETPEKPEN PEKPEKPGYG GEPGDGGHDG GGHDGGGHDG GHDDGYGGGD HGGGGGGGGH HGGGGGGDHG GGNGGGGGGT PEQPVSPPAT DEEPPAPAPE LARTGTDGSA LSGLFASAAA AIAAGAGLLL FGRRRARA
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