| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4924 |
|---|
| Symbol | |
|---|
| ID | 9248811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014211 |
|---|
| Strand | + |
|---|
| Start bp | 58856 |
|---|
| End bp | 59521 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003682813 |
|---|
| Protein GI | 297563840 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.464248 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACACG CACCCACCCC CACACCGGCG CTGCGGGTCC GCGGCGTCCA CAAGTCCTAC
GGCCGCCACC ACGTGCTGCG CGGCGCCGAA CTCGAACTCC CCGAGGCCTG CCTGGCCGGA
CTGGTCGGGG AGAACGGCTC CGGCAAGTCC ACCCTGCTGC GCATCCTCTC GGGCGTCCTC
GCCCCCGACC GCGGCACCGT CGAGCACCCC GGCAGCCTGG GCTACTGCCC CCAGCACACG
GTGCTGAACC CGGCCTTCAC CGTCTCCCAG CACCTGCGCC TCTTCCAGGT CGCGCACGAC
CTGCCCGACC TGTCCCGCGC CCGCGAACTC CTCGACGTCC TCGGGTTCGC CGAGTACCTC
CACCACCGGG TCTCCACGCT CAGCGGCGGC ACCCGCCAGA AGCTCAACCT CACCCTCGCG
CTGATGCACG ACCCGCACCT GCTGCTCCTG GACGAGCCCT ACCAGGGGTT CGACTGGGAC
ACCTACGAGC GGTTCTGGCG GCTGGCGGCC GACCTGCGGG ACCGGGGCCG CTCCGTGCTG
GTGGTCTCGC ACATCGCCTT CGACACGGTG CGCTTCGACC GCCTGTGGCG GCTGGAGGGC
GGGCGTCTGG TGGAGGGGGC GTCCTCGTCG GCGCCCTCGG CCCCCGCGGC GGCGGAGGGC
CGGTGA
|
|---|
| Protein sequence | MSHAPTPTPA LRVRGVHKSY GRHHVLRGAE LELPEACLAG LVGENGSGKS TLLRILSGVL
APDRGTVEHP GSLGYCPQHT VLNPAFTVSQ HLRLFQVAHD LPDLSRAREL LDVLGFAEYL
HHRVSTLSGG TRQKLNLTLA LMHDPHLLLL DEPYQGFDWD TYERFWRLAA DLRDRGRSVL
VVSHIAFDTV RFDRLWRLEG GRLVEGASSS APSAPAAAEG R
|
|---|
| |