Gene Ndas_4916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4916 
Symbol 
ID9248803 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp49339 
End bp50544 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content73% 
IMG OID 
Productprotein of unknown function DUF418 
Protein accessionYP_003682805 
Protein GI297563832 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.511749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.649012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAGCA CGACACCGCG AAGCACGGCC ACGGCCCGCC CGACCACCCG GCTGCCCCTG 
CTCGACGTCC TGCGCGGCGT CGCCATCATG GGCACCCTGG GCACCAACGT GTGGCTGTTC
GCCGCACCGG GCGCCGAGGC GGGCATCATC TTCGTCCCGG ACTCGATCGG CCCGATGGCG
GCCTTCCGCG AGGACCCGTC GGCGGCGACC CTGGCGCAGG GCCTGTTCGC CTTCGCCGCC
AACGGCAAGT TCCTGGCCCT GCTCACCCTG CTCTTCGGTG TGGGGCTGGC CATCCAGTTC
CGCTCCGCGG CCAGGCGCGG CGGGCGCTGG CCCGGCCCCT ACAAGTGGCG GGCGCTGTTC
CTGTTCGCCG AGGGGCTCGT GCACTTCACG CTGGTCTTCG CCGCGGACGT GCTCATGGGC
TACGCGGCGG CCTCGATCGT GGTGGCCTGG CTGCTCACCC GGTCGGAACG GGCGCAGAAC
GCCGTGATGT GGACGTGCGC CGCCCTCCAC CTGGCCTTCG TCGGCCTGGT CACGGCCGCG
CTCCTGTCCG AACCGGATCC GCAGGGCGCC GAGGTCCCGC CCGAGGCCGT GGAACTGTAC
GCCGAAGGCG GTTACCTGGA GCAGGTCGCC TTCCGGCTCG ACAACGCGCT GCTGTTCCGG
GCCGAACCGG TCGTCACCTT CGCCCTGATG GTGTTCATGT TCCTGCTGGG CGTACGGCTC
CTCCGCGCCG GGGCCTTCGG CGGCGACGAC ACCGGCCGCC GGATCCGGGG CCGCCTGCTC
GCCTGGGGGC TGGGGATCGG GCTGCCGGTC AACCTGGCCA CGTCCCTGGC CGGACCCGAC
CTGTTCATGC TGGACCGCTA CGCCGCCGCG CCCGTCGTGG CGCTCGGCCT GGTCGGCGCG
GTCGGCTGGG TCGTGGACCG GGCGAACCCC GCCGGACGGG GGATCACCGC CGTGTCCTCC
CTGGGGCGGA TGGCGATGAG CGGCTACGTC GCGCAGAACG TCGTCTGCAT GCTGGTCTGC
TACGGCTTCG GCCTGGGGCT GGCCGCACGC CTGGCCGACA CCGGCCCGTG GTGGGTGATG
GGCCTGTGGG CGTCGGTGTG CGCCCTGCTC CTGACCGTCT CGACGCTCTG GCTGCGCCGC
TTCCGGGCGG GGCCGCTGGA GGCGTTGCAG AAGGCCGTGC TGGCGCGGGT GCCCGAACGC
CGCTGA
 
Protein sequence
MTSTTPRSTA TARPTTRLPL LDVLRGVAIM GTLGTNVWLF AAPGAEAGII FVPDSIGPMA 
AFREDPSAAT LAQGLFAFAA NGKFLALLTL LFGVGLAIQF RSAARRGGRW PGPYKWRALF
LFAEGLVHFT LVFAADVLMG YAAASIVVAW LLTRSERAQN AVMWTCAALH LAFVGLVTAA
LLSEPDPQGA EVPPEAVELY AEGGYLEQVA FRLDNALLFR AEPVVTFALM VFMFLLGVRL
LRAGAFGGDD TGRRIRGRLL AWGLGIGLPV NLATSLAGPD LFMLDRYAAA PVVALGLVGA
VGWVVDRANP AGRGITAVSS LGRMAMSGYV AQNVVCMLVC YGFGLGLAAR LADTGPWWVM
GLWASVCALL LTVSTLWLRR FRAGPLEALQ KAVLARVPER R