Gene Ndas_4915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4915 
Symbol 
ID9248802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand+ 
Start bp48678 
End bp49298 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content74% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003682804 
Protein GI297563831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.259096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.574827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA CAGCGGACCA CGAGGAGCGC AGGCGGCAGG TCGCCCGCGC GCTCCTGAGC 
ACGGTGGGGG AGCGGGGGCT GGCGCGGACC ACCCTCGCCG ACGTCGCCGA CCGGGCCGGC 
GTCTCGGTCG GCCTGGTGCA GCGCTACTTC CGCACCAAGT CGCAACTGCT GCGCTTCGGC 
GTGGAGTACC TCTACAAGCA GGGCGCCGAC CGGCTGACGG CGGTGAACAC CGACGGGCCG 
CCGATCGCCT CGGCCCGCGA CTGGGTCTCC CGCGCGGCGC GGACCCTGCT GCCGCTCGAC 
GACGAACGCC GCGCCGAGCT GACCGTGTGG CTGGAGTTCC TGCCGGCCAC GATGACCGAC 
CCGGAGATGT CGCGCCTGCA CAAGGACACC ACCGCCGAGC TGGTGGGCGT GTTCACGCAG 
GTGATGGACG AGGCGGTGCG CCGGGGCGAA CTCCCGCCCG GCACGGACAC GGCGGCCGAG 
GCCGCCGGGC TCGTCGCCCT CGTGGACGGC CTGACCGTGC ACCACCTCAT CACCGGCGAC 
GACGCCTTCT CCGAGAGCGC GGTCCGCGCC GCGCTCGCCA CCCACCTGGA CCGGCTCTTC 
CCCGCCCCCG AGAGGCCGTG A
 
Protein sequence
MARTADHEER RRQVARALLS TVGERGLART TLADVADRAG VSVGLVQRYF RTKSQLLRFG 
VEYLYKQGAD RLTAVNTDGP PIASARDWVS RAARTLLPLD DERRAELTVW LEFLPATMTD 
PEMSRLHKDT TAELVGVFTQ VMDEAVRRGE LPPGTDTAAE AAGLVALVDG LTVHHLITGD 
DAFSESAVRA ALATHLDRLF PAPERP