Gene Ndas_4911 details

Gene Information

• Locus tag: Ndas_4911
• ID: 9248798
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014211
• Strand: +
• Start bp: 42718
• End bp: 45729
• Gene Length: 3012 bp
• Protein Length: 1003 aa
• Translation table: 11
• GC content: 76%
• Product: Beta-galactosidase
• Protein accession: YP_003682800
• Protein GI: 297563827

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.114803
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 0.456703
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGCCCGCCA TCCGCAAGCC CGCCTACCTG GAGGACTTCG CGCCCTCCGA GGGGACCCTC 
GCGCCCCGCG CCCGCTTCTC CTCCGACGCC CCGTCCCTGG ACCTCAACGG CACGTGGCGG 
TTCCGGCTGC TCGACCGCGC GCGGGCCGAC ACCGACGGGT TCGAGGAGCC CGGCCACGAC 
GACTCCGACT GGTCCGAACT GCCGGTGCCC GCCCACTGGC AGATGCACGG CCACGGCGCC 
CCCGCCTACA CCAACATCTC CTACCCCTTC CCGATCGACC CCCCGTACGT GCCCGATGAC 
AACCCGACCG GCGACCACCG GCGCGTCTTC GACCTTCCCC GGGAGTGGCC CGAGGGGGCG 
GCGGTCCTGC GCTTCGACGG GGTCGACTCC TGCTTCCGCG CGTGGCTGAA CGGCACCGAG 
CTGGGCTTCT CCACCGGGAG CCGCCTGGCC GCCGAGTTCG AGGTCGGCCA CCTGCTGCGC 
CCGGGGCGCA ACACCCTGGC GGTGCGCGTC CACCAGTGGT CGGCGGCCAG CTACCTGGAG 
GACCAGGACA TGTGGTGGCT GTCGGGGATC TTCCGCGACG TCACCCTCCT CGCCCGGCCC 
GCCGACGGGG TCGGCGACCT CGCGGTGAGC GCCGCCTACG ACCACACCAC GGGCACGGGT 
ACCCTGCGCG TGGACGTGGC CGGATCCGCC GACGCCCTGG TCAGCGTTCC CGAACTGGGG 
CTGGTGGACG CCGCCGCCGG TGTGGACCAC GGGGTCGGCG CGGTCGAGCC GTGGACGGCC 
GAGACGCCCC GCCTGTACGA CCTGGAGGTG CGCACACCGG GGGAACGGGT CCGGACGCGG 
ACGGGCTTTC GGACCGTGGA GGTCTCCGGC GGGCTCCTGC GGGTCAACGG CCGCCCCCTG 
CTGCTGCGGG GCGTGAACCG CCACGAGTGG CACCCCGACC ACGGCCGCGC CGTGCCCCGG 
GAGACCATGC GCGAGGACGT GCTGCTGATG AAGCGGCACA ACGTCAACGC CGTGCGCACC 
AGCCACTACC CGCCCCACCC GGACTTCCTG GACCTGTGCG ACGAGCTGGG CCTGTGGGTC 
GTGGACGAGT GCGACCTGGA GACCCACGGG TTCGAGGAGG TCGGCTGGCG CGGCAACCCC 
TCCGACGACC CGCGCTGGCG CGAGGCCTAC CTGGACCGGA TGCGCCGCAC CGTCGCGCGC 
GACCGCAACC ACCCCAGCGT CGTCCTGTGG TCCCTGGGCA ACGAGTCCGG GACCGGGGAG 
AACCTGCGGG CCATGGCGGA GTGGACCCGC GCACACGACC CCTCCCGGCC GATCCACTAC 
GAGGGGGACC GAGACAGCGC CTACGTGGAC GTGTACTCGC GCATGTACGC GCCGCACGAG 
GAGGTGGACG CCATCGGCCG CCGGGAGGAG GCGCCGACCG CCGACCCGGC CGCCGACGGG 
CACCGGCGCG GACTGCCGTT CGTCCTGTGC GAGTACGGGC ACGCCATGGG CACCGGCCCC 
GGCGGGCTGG AGGAGTACCA GCGGCTCTTC GAGGAGCACG AGCGCTGCCA GGGCGGGTTC 
GTCTGGGAGT GGATCGACCA CGGGGTCCGC CGCCGCGAGC CGGACGGCAC CGCGTGGTTC 
GCCTACGGCG GCGACTTCGG CGAGGCCCTG CACGACGGCA ACTTCGTCGC GGACGGCCTG 
CTGCTGCCCG ACCGCACGCC CAGTCCCGGG CTGGAGGCCT ACGCCAAGAC CGTCGAACCG 
GTCCGCGTGG TCCCCGACCC GGCCGCCGGG ACCGTCCGCG TCACCAACAC CTGGGACTTC 
CGGGACACCG CGGGCCTGGC CTTCGTCTGG CGGGTCGAGG GGGAGGGGAT CCCCCTGGGG 
GAGGGCCCCC TGGACGTGCC GGTGCTCGCC GCCGGGGAGA GCGCCGAGGC GGTGCTGCCC 
GCACTGCCCG AGCCGTCCGG GGAGACCTGG CTGACCGTGT CCGTCCGGCT GGCCGAGGAC 
CAGCCCTGGG CCCCGGCCGG GCACGAGCTG GCCTGGGGAC AGGCCGAGGT GGGCGCCCCC 
GGGGAGCCGG GCGCGGCAGC GCCGGGGGTT CCGGGTGGGC AGGAAGGGAC GAGTGCGTCG 
GAGAGGTCGG GCGCGCTGCG AGAGCCGCGG GAGCCGGGGG ACCCGGGTGC GTGGCCGGGG 
GCGGAGGGAG CTGTCGTGCT TCCGGCGTCC GCCGGGCAGG ACGGCATCGT GCGGATCGGC 
CCCGGCCTGC TGGACGCGGG GACCGGCGCG CTGCTCTCCG TGGGCGGCCT GCCCGTGGAC 
GCGCCGGCCG TGGACCTGTG GCGCGCTCCG ACCGACAACG ACGTGGCCCG GCACGGGGAC 
TCCGTGGCCG TCCCCTGGCG CGCGGCGGGG CTGCACCGGC TCACCGAGCG CCTGCTGTCC 
ACCGGCTGGG AGGACGGCGC GTTCGTCGTC CGTACACGGC TGGCTCCGGC GGCCCAGGAG 
TTCGGCATGC GCGCCGCCTA CCGGTGGGGC GCCGACGGGG AGCGCCTGCT CCTGACCGTG 
GAGGCCGAGG CGGAGGGGGA GTGGCCCTGC CCGCTGCCGC GCTTCGGCGT GCACGTCGGC 
CTGCCCGCCT CCCTGGGCGA GGCGGAGTGG TTCGGCCGCG GACCCGGGGA GGCCTACCGG 
GACGTGTCCC AGGCCGCGCG GGTCGGCCGC TTCTCCAGCA CGGTCGACGG CCTCCAGACG 
CCCTACCTGC GGCCCCAGGA GAACGGCAAC CGCGTGGACG CCAGGTGGCT CGCCCTGCGG 
GCGGCGGACG GGACGGGCCT GCGGGTGGAG GGCGACCCGG TGTTCGACTT CACCGCGCGC 
CGCTGGGACA CGGCGGCGCT CGACGCGGCC GACCACCCGC ACGAACTGGT CCCCGGCGAC 
CGGATCCACC TGCACCTGGA CCAGGCGCAC CAGGGCGTGG GCTCGGCCTC GTGCGGCCCC 
GGGGTGCTCC CCGCCCACCG CCTTGCGGCC GGGAGCCACC GCCTCCGGCT CGCCCTGGTC 
CCGCTGGGCT GA 

 

Protein sequence

MPAIRKPAYL EDFAPSEGTL APRARFSSDA PSLDLNGTWR FRLLDRARAD TDGFEEPGHD 
DSDWSELPVP AHWQMHGHGA PAYTNISYPF PIDPPYVPDD NPTGDHRRVF DLPREWPEGA 
AVLRFDGVDS CFRAWLNGTE LGFSTGSRLA AEFEVGHLLR PGRNTLAVRV HQWSAASYLE 
DQDMWWLSGI FRDVTLLARP ADGVGDLAVS AAYDHTTGTG TLRVDVAGSA DALVSVPELG 
LVDAAAGVDH GVGAVEPWTA ETPRLYDLEV RTPGERVRTR TGFRTVEVSG GLLRVNGRPL 
LLRGVNRHEW HPDHGRAVPR ETMREDVLLM KRHNVNAVRT SHYPPHPDFL DLCDELGLWV 
VDECDLETHG FEEVGWRGNP SDDPRWREAY LDRMRRTVAR DRNHPSVVLW SLGNESGTGE 
NLRAMAEWTR AHDPSRPIHY EGDRDSAYVD VYSRMYAPHE EVDAIGRREE APTADPAADG 
HRRGLPFVLC EYGHAMGTGP GGLEEYQRLF EEHERCQGGF VWEWIDHGVR RREPDGTAWF 
AYGGDFGEAL HDGNFVADGL LLPDRTPSPG LEAYAKTVEP VRVVPDPAAG TVRVTNTWDF 
RDTAGLAFVW RVEGEGIPLG EGPLDVPVLA AGESAEAVLP ALPEPSGETW LTVSVRLAED 
QPWAPAGHEL AWGQAEVGAP GEPGAAAPGV PGGQEGTSAS ERSGALREPR EPGDPGAWPG 
AEGAVVLPAS AGQDGIVRIG PGLLDAGTGA LLSVGGLPVD APAVDLWRAP TDNDVARHGD 
SVAVPWRAAG LHRLTERLLS TGWEDGAFVV RTRLAPAAQE FGMRAAYRWG ADGERLLLTV 
EAEAEGEWPC PLPRFGVHVG LPASLGEAEW FGRGPGEAYR DVSQAARVGR FSSTVDGLQT 
PYLRPQENGN RVDARWLALR AADGTGLRVE GDPVFDFTAR RWDTAALDAA DHPHELVPGD 
RIHLHLDQAH QGVGSASCGP GVLPAHRLAA GSHRLRLALV PLG