Gene Ndas_4870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4870 
Symbol 
ID9248757 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014211 
Strand
Start bp1036 
End bp1593 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content75% 
IMG OID 
Productisopentenyl-diphosphate delta-isomerase, type 1 
Protein accessionYP_003682759 
Protein GI297563786 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0257995 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.425035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAGC ACAGGGCCGC CGCGGGCGCG GAGGGCGGCG CAGAGCGCGA ACTCGTGGTT 
CTGCTCGACG AGGAGCACCA GCGCGTGGGC GTCGCCGACA AGGCCACCGT GCACACCCGG
GAGACACCGC TGCACCTGGC GTTCTCCTGC TACGTCCTGG ACGCGGACGG GCGGGTGCTG
ATCACCCGCC GGGCCCTGGG CAAGACCACC TGGCCGGGGG TGTGGACGAA CAGCTGCTGC
GGCCACCCCG GCCCGGACGA GGACCTCGAC GCGGCGGTGC GCCGCCGGGT CGGCCAGGAG
CTGGGGATGC GCGTCAGCGG GGTGCGGCCC GCGCTGCCCG ACTTCCGGTA CCGGGCGGTG
TCGGCCGAGG GGATCGTGGA GAACGAGTTC TGCCCGGTCT TCTGGGCGCG TGCGGAGGAG
GGCCCGGACC CCGACCCGTC GGAGGTGGCC GAGTACGCGT GGACGGAGTG GGCGGACCTG
GTGGCGGTGG CCGAGCGGAC ACCGTGGCTG CTGAGCCCGT GGGCGGTGGA GCAGATCCCC
CGCCTGGACG CGCTCTGA
 
Protein sequence
MTQHRAAAGA EGGAERELVV LLDEEHQRVG VADKATVHTR ETPLHLAFSC YVLDADGRVL 
ITRRALGKTT WPGVWTNSCC GHPGPDEDLD AAVRRRVGQE LGMRVSGVRP ALPDFRYRAV
SAEGIVENEF CPVFWARAEE GPDPDPSEVA EYAWTEWADL VAVAERTPWL LSPWAVEQIP
RLDAL