Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4870 |
Symbol | |
ID | 9248757 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014211 |
Strand | - |
Start bp | 1036 |
End bp | 1593 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | isopentenyl-diphosphate delta-isomerase, type 1 |
Protein accession | YP_003682759 |
Protein GI | 297563786 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0257995 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.425035 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCAGC ACAGGGCCGC CGCGGGCGCG GAGGGCGGCG CAGAGCGCGA ACTCGTGGTT CTGCTCGACG AGGAGCACCA GCGCGTGGGC GTCGCCGACA AGGCCACCGT GCACACCCGG GAGACACCGC TGCACCTGGC GTTCTCCTGC TACGTCCTGG ACGCGGACGG GCGGGTGCTG ATCACCCGCC GGGCCCTGGG CAAGACCACC TGGCCGGGGG TGTGGACGAA CAGCTGCTGC GGCCACCCCG GCCCGGACGA GGACCTCGAC GCGGCGGTGC GCCGCCGGGT CGGCCAGGAG CTGGGGATGC GCGTCAGCGG GGTGCGGCCC GCGCTGCCCG ACTTCCGGTA CCGGGCGGTG TCGGCCGAGG GGATCGTGGA GAACGAGTTC TGCCCGGTCT TCTGGGCGCG TGCGGAGGAG GGCCCGGACC CCGACCCGTC GGAGGTGGCC GAGTACGCGT GGACGGAGTG GGCGGACCTG GTGGCGGTGG CCGAGCGGAC ACCGTGGCTG CTGAGCCCGT GGGCGGTGGA GCAGATCCCC CGCCTGGACG CGCTCTGA
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Protein sequence | MTQHRAAAGA EGGAERELVV LLDEEHQRVG VADKATVHTR ETPLHLAFSC YVLDADGRVL ITRRALGKTT WPGVWTNSCC GHPGPDEDLD AAVRRRVGQE LGMRVSGVRP ALPDFRYRAV SAEGIVENEF CPVFWARAEE GPDPDPSEVA EYAWTEWADL VAVAERTPWL LSPWAVEQIP RLDAL
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