| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4855 |
|---|
| Symbol | |
|---|
| ID | 9248741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5756459 |
|---|
| End bp | 5757085 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003682744 |
|---|
| Protein GI | 297563770 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.224896 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCGG TCCAGGAGCT TCCTGACCGG GAGCTGTTGA CGAGGCACGC TCAGGGCGAC
GACCAGGCCT TCGCGGTCCT GGTGCGTCGG CACCGCGAGC GCCTTTGGGC TGTCGCCGTG
CGCATGATGG GCGACCGCGA GGAGGCCTCC GACGCCCTCC AGGACGCGTT CCTGTCCGCG
TTCCGCGCCG CCGACCGCTT CCGCGGTGAG GCGCAGGTGA GCACGTGGCT GCACCGGATC
GTGGTGAACG CCTGCCACGA CCGGCTGCGC CGCCGCAAGG TGCGCCCGGC CACCCCGACC
GAGGACGAGA CCCTGGACGT CATGTCCAAC GAGCGTCTCG GCCGCTCGGG AGGGGGGCCG
GACCACGCCT CGCAGACCGA GACGCGCCTG GACGTCAACG CCGCGCTGGA CCTGCTCCCG
CTGGACCAGC GCATGGCGCT GACCCTCGTG GACATGCTCG GCTACCGGGT GGAGGAGGCC
GCGCAGATCC TCGACGTGGC GTCGGGGACG GTCAAGAGCA GGTGTGCGCG AGGTCGCGCC
AGACTTCTCC CGTCGCTGGC CCATCTGAGG AACCCTCGAC AGGCCGGAGA CGTCACAACT
GGGAGAGGAG GTGCCAACCC ATCGTGA
|
|---|
| Protein sequence | MDAVQELPDR ELLTRHAQGD DQAFAVLVRR HRERLWAVAV RMMGDREEAS DALQDAFLSA
FRAADRFRGE AQVSTWLHRI VVNACHDRLR RRKVRPATPT EDETLDVMSN ERLGRSGGGP
DHASQTETRL DVNAALDLLP LDQRMALTLV DMLGYRVEEA AQILDVASGT VKSRCARGRA
RLLPSLAHLR NPRQAGDVTT GRGGANPS
|
|---|
| |