| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4847 |
|---|
| Symbol | |
|---|
| ID | 9248733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5743990 |
|---|
| End bp | 5745285 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003682736 |
|---|
| Protein GI | 297563762 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCTTCT TCGGTGATCT GCGCGTGGTC CTGCGGGGGC CCCGGTTCCG CCGCCTGTTC
GGCACCCGGC TGGTGGCGCA GTTCTCCGAC GGGGTGTACC AGGCCGGGCT GGCGGGCTTC
GTCTTCTTCA CCCCCGAGCA GCACACCAGT GCGGGCGCCG TCGCCGCGGC CTTCGCGGTG
CTGCTCCTTC CGTTCTCGGT GGTGGCGCCG TTCGCCGGGG TCCTGATCGA CAGGTGGCCC
CGGCGCCAGA TCCTGCTGCT GTCCTCCCTG GCCAAGGCGG CGCTCGCGGT GGCGAGCGCG
TTCCTGGTGG CACGGGGCGA GAGCCCCGCC TTCCTCCTCA CCGCGCTCCT GGTGCTGAGC
GTCAACCGCT TCTTCCTGTC CGGGCTGTCC GCCGGACTGC CCTACGTGGT GGCCCGGGAC
AAGCTGATGA TGGCCAACGC GGTCACGCCC ACCAGCGGTA CCGCGGCGAG CTTCCTGGGC
GCGGGGGCGG GCGCCGCGAT CGGGCTGCTC GGCGGCGAGG ACGCCCTGGG CACCGGGCTC
ATCCTGTCCA TGGCCGCGCT CGGCTTCGCC GGGGCGGCGC TGGTCTCCCT CACCCTGGGC
CACGACGAGC TGGGACCGCA CCTGGAGCGG GAACCGGACG AGGTCGCGGC GGCCGTGCGC
AACGTGGTGC GGGGCATGGT CTCGGGGGTG CGCCACCTCT GGGCGCGCCC GGAGGCCCGC
GACGCGCTGC TCACGATCGG CGGCCACCGG GTGCTGTTCG GGATCTCCAC GCTGCTGACG
CTGCTGCTGT ACAACAACAC CTTCACCGGC GGCGGTGTGG CCGGACTGGC CGGTTTCTCG
GTGGCGATGG GCCTGTCGGG GGCGGGGTTC CTGGTGGGCG CGGTGGCCAC GCCGTGGGCG
ACCGCCCGGA TGGCCCCGGG GGCGTGGATC GTGCTGCAGC TGGCGGCGGC GTCGGCGGTC
CTGGTGGTGT TCGGACTGCC CTTCTCACCC GTGCTCTTCC CCGTGGCCGC GTTCGCGCTG
GGCTTCGTCT CCCAGGGGGT CAAGGTCACC GTCGACACGT TGGTTCAGCG ACATGTCGAC
GACGCGTTCC GGGGGCGGGT GTTCTCGGTG TACGACGTGC TGTTCAACGC CACGTTCGTC
CTGGGCGCGG CGCTGGCCGC CGCGCTGGTC CCGCCGTCCG GGGTGAACCC CGCGGTGGTC
GTCGCGATGG CCGCGGCCTA CCTGGTGATG GGCGCCGCCT GGGTCGTGCG CGGGCGCCGC
GCCAGCGCCG CCGAGGCGGA GCGCGAGGTC GCGTAG
|
|---|
| Protein sequence | MSFFGDLRVV LRGPRFRRLF GTRLVAQFSD GVYQAGLAGF VFFTPEQHTS AGAVAAAFAV
LLLPFSVVAP FAGVLIDRWP RRQILLLSSL AKAALAVASA FLVARGESPA FLLTALLVLS
VNRFFLSGLS AGLPYVVARD KLMMANAVTP TSGTAASFLG AGAGAAIGLL GGEDALGTGL
ILSMAALGFA GAALVSLTLG HDELGPHLER EPDEVAAAVR NVVRGMVSGV RHLWARPEAR
DALLTIGGHR VLFGISTLLT LLLYNNTFTG GGVAGLAGFS VAMGLSGAGF LVGAVATPWA
TARMAPGAWI VLQLAAASAV LVVFGLPFSP VLFPVAAFAL GFVSQGVKVT VDTLVQRHVD
DAFRGRVFSV YDVLFNATFV LGAALAAALV PPSGVNPAVV VAMAAAYLVM GAAWVVRGRR
ASAAEAEREV A
|
|---|
| |