Gene Ndas_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4840 
Symbol 
ID9248726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5735768 
End bp5736601 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content72% 
IMG OID 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_003682729 
Protein GI297563755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTGG AAAGAAGAGA CGAGCCGGGC CGACACACAT GGGTGGACCG CAGGACCGTT 
CTGCGGGGGA CCGCCCTCGC CGCCGGGGGA GTGCTCCTCG GCGGGATCGC CGGGATCCCC
GCCGTGGACC GGGCCTCCGC GGCCACGCGA CCCAAGGTGT ACACGCGCGC CGACTGGGGG
GCGCGCGCTC CGAAGAACAA GATCGAGGTC GTGCGCCGCG GGGCCACGCA CATCGTCGTG
CACCACACCG CCACGGCGAA CGCGTCCGAC ACCTCGACCT CGCACGCCGC GTCGCTGTCG
CGCTCCATCC AGCGGTACCA CATGGACACC AACGGGTGGA GCGACATGGG GCAGCAGTTC
ACCATCAGCC GCGGCGGCCA CATCATGGAG GGGCGCGACC AGAGCCTGCA GGCCGTCAGC
GCGGGACACC ACGTGCTCGG CGCGCACACC GCCAACCACA ACGAGCACGC GATCGGGATC
GAGAACGAGG GCACCTACAC CTCGGCGACC CCGCCCGCGC TCCTGTTGGA GTCGTTGGCC
GACACCTGCG CCTGGCTGTG CCTGGCCTAC CGGCTGGACC CCGACGAGGC CATCGTCGGC
CACCGCGACT TCAACGCGAC GGGCTGTCCC GGCGACAAGC TCTACGCGGC GCTTCCCCAG
CTCCGCTCCA CCGTCAGGAG CAGGATGCGG GAACAGCTCG CCCACCCGGG CGCGGCGGCG
GTCGCGGCGC CGGAGCCCGA CCAGCTGCCG ACCTACCCCG ACGTGCCGCG GGACGAACAG
GTGAGGCCCT ACAGTCACGG ACCCGCCGTC GGTGAGCGCG ACACGTTCAC GTGA
 
Protein sequence
MTVERRDEPG RHTWVDRRTV LRGTALAAGG VLLGGIAGIP AVDRASAATR PKVYTRADWG 
ARAPKNKIEV VRRGATHIVV HHTATANASD TSTSHAASLS RSIQRYHMDT NGWSDMGQQF
TISRGGHIME GRDQSLQAVS AGHHVLGAHT ANHNEHAIGI ENEGTYTSAT PPALLLESLA
DTCAWLCLAY RLDPDEAIVG HRDFNATGCP GDKLYAALPQ LRSTVRSRMR EQLAHPGAAA
VAAPEPDQLP TYPDVPRDEQ VRPYSHGPAV GERDTFT