Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4840 |
Symbol | |
ID | 9248726 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5735768 |
End bp | 5736601 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD |
Protein accession | YP_003682729 |
Protein GI | 297563755 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTGG AAAGAAGAGA CGAGCCGGGC CGACACACAT GGGTGGACCG CAGGACCGTT CTGCGGGGGA CCGCCCTCGC CGCCGGGGGA GTGCTCCTCG GCGGGATCGC CGGGATCCCC GCCGTGGACC GGGCCTCCGC GGCCACGCGA CCCAAGGTGT ACACGCGCGC CGACTGGGGG GCGCGCGCTC CGAAGAACAA GATCGAGGTC GTGCGCCGCG GGGCCACGCA CATCGTCGTG CACCACACCG CCACGGCGAA CGCGTCCGAC ACCTCGACCT CGCACGCCGC GTCGCTGTCG CGCTCCATCC AGCGGTACCA CATGGACACC AACGGGTGGA GCGACATGGG GCAGCAGTTC ACCATCAGCC GCGGCGGCCA CATCATGGAG GGGCGCGACC AGAGCCTGCA GGCCGTCAGC GCGGGACACC ACGTGCTCGG CGCGCACACC GCCAACCACA ACGAGCACGC GATCGGGATC GAGAACGAGG GCACCTACAC CTCGGCGACC CCGCCCGCGC TCCTGTTGGA GTCGTTGGCC GACACCTGCG CCTGGCTGTG CCTGGCCTAC CGGCTGGACC CCGACGAGGC CATCGTCGGC CACCGCGACT TCAACGCGAC GGGCTGTCCC GGCGACAAGC TCTACGCGGC GCTTCCCCAG CTCCGCTCCA CCGTCAGGAG CAGGATGCGG GAACAGCTCG CCCACCCGGG CGCGGCGGCG GTCGCGGCGC CGGAGCCCGA CCAGCTGCCG ACCTACCCCG ACGTGCCGCG GGACGAACAG GTGAGGCCCT ACAGTCACGG ACCCGCCGTC GGTGAGCGCG ACACGTTCAC GTGA
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Protein sequence | MTVERRDEPG RHTWVDRRTV LRGTALAAGG VLLGGIAGIP AVDRASAATR PKVYTRADWG ARAPKNKIEV VRRGATHIVV HHTATANASD TSTSHAASLS RSIQRYHMDT NGWSDMGQQF TISRGGHIME GRDQSLQAVS AGHHVLGAHT ANHNEHAIGI ENEGTYTSAT PPALLLESLA DTCAWLCLAY RLDPDEAIVG HRDFNATGCP GDKLYAALPQ LRSTVRSRMR EQLAHPGAAA VAAPEPDQLP TYPDVPRDEQ VRPYSHGPAV GERDTFT
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