Gene Ndas_4837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4837 
Symbol 
ID9248723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5729648 
End bp5731303 
Gene Length1656 bp 
Protein Length551 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003682726 
Protein GI297563752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCG CCCGAGTACG AGCACAGTCC CAGCTCACCC TCAACGACAT CACCCACCGC 
TACGGCGACC ACACCGTGCT CGACCGTGTC ACCCTCACCA TCAGCCCCGG CGAGCGCGTC
GGGATCATCG GCGACAACGG CTCGGGCAAG AGCACGCTGC TGCGCCTGCT CGCCGGGGAG
GAGGAGCCCA CCAACGGCGA CCTCACGGTC CGGGCTCCGG GAGGAACCGG CTACCTGCCG
CAGACCCTGG AGGCGGTGGG GGTCTCCACC GGCACCGTCG GCGACGCGAT CGACTCCGCC
CTGGCCGTCC TGCGCGACAT GGAGGCGCGC CTGCGCGCGG CGGAGAGCAC GCTCGGCTCG
GCCACCCCGG AGGAGCTGGA CGCCTACGGC GACCTGCTGG CCCGGTTCGA GGCGCGCGGC
GGCTACGACG CCGACGCGCG CGTCGACGCC GGACTGCACG GGCTGGGCCT TCCCGGCCTG
GACCGCGACC GCCCGCTGAG GACCCTCTCC GGCGGGGAGC GCTCGCGCCT GGCCCTGGCC
GCGATGCTGG CGGCCTCGCC CGAACTGCTC CTGTTGGACG AGCCCACCAA CGACCTGGAC
GACCGCGCGG TCGCCTGGTT GGAGGACCGG CTCCGCCGCC ACCGGGGCAC GGTCGTGGCC
GTCACCCACG ACCGGGCGTT CCTGGCCAAC GTGACCGACA CCGTCCTGGA GGTCGACCAC
GACCTGCGCC GGATCCACCG GTACGGCAAC GGCTACGACG GGTTCCTGGC CGCGAAGGCC
TCGGCCAGGG CCCGGTGGAT CCGCGAGTAC GAGGAGTGGA GGGCCGACCT GGCCCGGCAG
CGCAGGCTGG CCGAGAACAG CATCGCGGCC CTGAAGGCCA TCCCGCGCAA GATGGAGAAG
GCCGCGTTCG GCCACGGGGC TTTCAAGATG CGGGGGGCCG CGCACGGTTC CATGGGCCGC
GTCCGCAACG CCAAGGAGAG GGTGGAGAGG CTGACCGCCG ACCCGGTGGC GCCGCCGCCG
GTACCGCTGC GGATGACCGC CGGGTTCACC GGATCCCGCA CCGGTGAGAG CGCTCCGGCC
GCCTCGCTGG AGGGGGTCCG GGTGGACCAC CGCCTGGAGG TGCCCTGCCT GGACCTCGCT
CCGGGCGAAC GCGTGCTGGT CACCGGGCCG AACGGGGCGG GCAAGACCAC CCTGCTCCGG
CTCCTGTCCG GGGACGCGGT CCCCGACGAG GGGCGGGTTT CGGTCCCCGG CCGGGTGGGT
TACCTGCGTC AGGAGGACGG TTCCTTCGCC GCCGGACAGA CCGTGCTCGG CGCCTACGCC
GCGGGGCGGC CCGGGTTCGC CGAGGACCAC CGGGACGAGC TCGCCTCGCT CGGGCTGTTC
CGGCCCGGGG AGCTGGACCA GCCGGTGGCG TCCCTGTCGG TGGGCCAGCG CCGCAGGATC
GAGGTCGCCC GGCTGACGTC GGGTGCCTAC GACCTGCTGC TCCTGGACGA GCCGACCAAC
CACCTCTCCC CCGGTCTCGT GGAGGACCTG GAGGAGGCGC TGACACGTTA CGAGGGCACG
CTGGTGGTCG TCACCCACGA CCGCAGGACC CGACAGCGCT TCACCGGCCG CCACCTGGAA
CTACGGGAGG GGATCGTGGT CAGCGACTCC GTGTGA
 
Protein sequence
MLTARVRAQS QLTLNDITHR YGDHTVLDRV TLTISPGERV GIIGDNGSGK STLLRLLAGE 
EEPTNGDLTV RAPGGTGYLP QTLEAVGVST GTVGDAIDSA LAVLRDMEAR LRAAESTLGS
ATPEELDAYG DLLARFEARG GYDADARVDA GLHGLGLPGL DRDRPLRTLS GGERSRLALA
AMLAASPELL LLDEPTNDLD DRAVAWLEDR LRRHRGTVVA VTHDRAFLAN VTDTVLEVDH
DLRRIHRYGN GYDGFLAAKA SARARWIREY EEWRADLARQ RRLAENSIAA LKAIPRKMEK
AAFGHGAFKM RGAAHGSMGR VRNAKERVER LTADPVAPPP VPLRMTAGFT GSRTGESAPA
ASLEGVRVDH RLEVPCLDLA PGERVLVTGP NGAGKTTLLR LLSGDAVPDE GRVSVPGRVG
YLRQEDGSFA AGQTVLGAYA AGRPGFAEDH RDELASLGLF RPGELDQPVA SLSVGQRRRI
EVARLTSGAY DLLLLDEPTN HLSPGLVEDL EEALTRYEGT LVVVTHDRRT RQRFTGRHLE
LREGIVVSDS V