Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4826 |
Symbol | |
ID | 9248711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5718193 |
End bp | 5720367 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | glycoside hydrolase clan GH-D |
Protein accession | YP_003682715 |
Protein GI | 297563741 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.482149 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCATCGC ACCGCCCCCT CTCCGGCGGC TCCGACCTCC CCCACCTGCG CGCCGCCGGG GTGAGCCTCC TGCTGGACCT GACCGGCCAG ACCCTGCCCC GGGTCCTGCA CTGGGGTTCG GACCTGGGCG ACCTCTCCCG CGGGGAGCTG GACGACCTGC GCCTGGCGCT GAGCCCGCAG CCCATCGGGT TCTCCGTGGA CGGGCCGGTG GAGGTGGCCG TGCTCCCCGA GCAGTCCGCC GGCTGGCTCG GCACGCCGGG CCTGGTCGGC AACCGGGGCG GCGCCGACTT CTCCACCGCC TTCCGCGTGC GCGAGTCCGC GGTGGAGCAC CGCTCCCCGG CGGGCGGGCG CCTGACCGTA CGCGCCGAGG ACGCCCGGGC CGGGCTCTCC CTGGACCTCG TGGTCGAGCT GACCCCCTCG GGCCTGGTCC GCCAGCGAGC CACCGTCACC AACGGGGCCG CGTCCCCCTT CGCCGTGGAC GCCGTCAACC TCGTCCTCCC CGTCCCGGCC GAGGCGGTCG AGCTGCTCGA CTTCGGCGGG CGCCACATGC GCGAGCGCAG CCCGCAGCGG ACCGCCTTCA CCCAGGGCTT GCGGGTGCGC GAGAACCGTA CCGGGCGCAC CGGTTACGAC GCGGCCCACC TGCTGGCCGC GGGGACGCAC GGCTCCGGCA ACCGCTCCGG CGAGGTGTGG GCCGTGCACA CGGCCTGGTC GGGCAACCAC CGCACCTTCG CCGAGCGCAC CTACCACGCG GTGTCCCTGC TGGGTTCGGG CGAGCTGCTG CTCTCCGGGG AGGTCGTGCT GGCCGAGGGG GAGTCCTACA CCACCCCGTG GCAGTACGGC TCGCACGGGC ACGGGCTGGA CGAGGTCTCC GCCCGCTTCC ACCGGCACCT GCGCTCGCGC CCGCACCACC CCTCCACCCC GCGCCCGGTG GTCGTCAACA CCTGGGAGGC CGTCTACTTC GACCACGGCC TCGACCGGCT GCGCGAGCTG GCCGACGCCG CCGCCCGCGT GGGCGCCGAG CGGTTCGTGC TCGACGACGG CTGGTTCGGC TCGCGCCGCG ACGACCGGCG CGGCCTCGGC GACTGGTACG TCTCCGACGA GGTGTGGCCG GACGGGCTGG GCCCGCTCAC CGACCACGTC ACCGGGCTCG GCATGCAGTT CGGGCTGTGG GTGGAGCCGG AGATGGTCAA CGAGGACTCC GACCTGGCCC GCGCGCACCC GGACTGGATC ATGGCCGCGG GCGACCGGCT GCCCCGGCCG GCGCGCTCCC AGCAGGTGCT CGACCTGGCC CGTCCGGAGG CGTTCGCGTA CGTCCTGGAG CGCCTGGACG ACCTGCTGTC CGCCTACCCG GTCTCCTACC TCAAGTGGGA CCACAACCGG GACCTGGTCG ACGCGGGGCA CCGGCCGACC GGGCGGGCCG GGGTCCACGG CCAGACCCTG GCGGTGTACC GGCTGATGGA CGAACTGCGC CGCCGCCACC CGGCTGTGGA GATCGAGTCC TGTTCGTCCG GCGGCGGACG GGTGGACCTG GGGGTGCTGG AGCGCACCGA CCGCGTGTGG GTCTCCGACT GCATCGACGC CCTGGAGCGG CAGGACATCC AGCGGTGGAC CAACGCGCTC GTCCCGCTGG AGCTGATGGG CACCCACGTG GGGGCGGGCA CCGCGCACAC CACCGACCGC CGCCACACCG TCGACTTCCG GGCCGGGACC GCCCTGTTCG GGCACTTCGG GATCGAATGG GACCTCACCC GCGCCGACCC CGCCGACCTG GCCCGCCTGC GGGAGTGGGT GGAGCTGTAC AAGGAGCTGC GCGGCTTGCT GCACACGGGG ACCGCCGTGC ACGGCGACCA CCCGGACCCG GCGGTCCGGG TGCACGGGGT GGTCGCCGAG GACGGTTCCG AGGCGCTCTA CGCGATCGTC GCCACGGGAA CCTCGGAGCT GTACCCGACC GGGCCCGTCC GGTTGCCGGG CCTGCGCCCG GAGGCGGTCT ACCGGGTCCG CCCGCAGGCG CCCGGGGACG TGCCCGACGG CAACGCGCAC CGGTGGGGGG TGCCGCTGCC CTGGTGGACC CCCGAGGGCG TCCGCGTCAG GGGCGCGGCG CTGGAGCGCG CGGGCCTCCA GGCGCCGGTG CTCTTCCCGG AACGGCTGGT CCTGGTGCGC GCCACCCGGC TCTGA
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Protein sequence | MASHRPLSGG SDLPHLRAAG VSLLLDLTGQ TLPRVLHWGS DLGDLSRGEL DDLRLALSPQ PIGFSVDGPV EVAVLPEQSA GWLGTPGLVG NRGGADFSTA FRVRESAVEH RSPAGGRLTV RAEDARAGLS LDLVVELTPS GLVRQRATVT NGAASPFAVD AVNLVLPVPA EAVELLDFGG RHMRERSPQR TAFTQGLRVR ENRTGRTGYD AAHLLAAGTH GSGNRSGEVW AVHTAWSGNH RTFAERTYHA VSLLGSGELL LSGEVVLAEG ESYTTPWQYG SHGHGLDEVS ARFHRHLRSR PHHPSTPRPV VVNTWEAVYF DHGLDRLREL ADAAARVGAE RFVLDDGWFG SRRDDRRGLG DWYVSDEVWP DGLGPLTDHV TGLGMQFGLW VEPEMVNEDS DLARAHPDWI MAAGDRLPRP ARSQQVLDLA RPEAFAYVLE RLDDLLSAYP VSYLKWDHNR DLVDAGHRPT GRAGVHGQTL AVYRLMDELR RRHPAVEIES CSSGGGRVDL GVLERTDRVW VSDCIDALER QDIQRWTNAL VPLELMGTHV GAGTAHTTDR RHTVDFRAGT ALFGHFGIEW DLTRADPADL ARLREWVELY KELRGLLHTG TAVHGDHPDP AVRVHGVVAE DGSEALYAIV ATGTSELYPT GPVRLPGLRP EAVYRVRPQA PGDVPDGNAH RWGVPLPWWT PEGVRVRGAA LERAGLQAPV LFPERLVLVR ATRL
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