Gene Ndas_4768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4768 
Symbol 
ID9248651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5658720 
End bp5659457 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003682658 
Protein GI297563684 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCC CCCGATTCCT CCTGACACCG CACCCGAAGC ACACCCTCCT CCTGGCCGTG 
GCGGCGGCGT TCGCCCTGAT CCTGGGCACC GTCGTGGCGG CCCCGGCCGC GCACGCCGCA
CCGACCTCGG TCAGCACCGG ACCGGAACTG CGCCAGGGCA GCTCCGGAGC CGGGGTGAGC
GCCGTCCAGG AGCGCCTCGC CGAACTGGGC TACTGGATCG ACGGCGTGGA CGGCCAGTTC
GGCTTCCACA CCGAGCAGGC CGTCGTGGCG CTCCAGAAGG CCGCCGGGAT CGCCCGCGAC
GGCGTCGTGG GCCCCGCCAC CCGCGCCGCC CTCGCCGAGG GCGTGCTCCC CGAGGCCCAG
AGCACCTCCG GCGACCTGCT GGAGATCGAC CTGGACCGGC AGCTGTTGCT GGTGGTCTCC
GGCGGCGAGG TGGAGCGCGT CCTCAACACC TCCACCGGAT CCGGTCAGCC CTACGAGTCC
TCGGACGGCA CCGAGCGGAT CGCCACCACC CCGACCGGCA CCTACACCGT CTTCCGCGAG
GTCGACGCCT GGGACCCCGG TCCCTACGGT GCGCTGTACA GACCGAAGTA CTTCAACGGC
GGCATCGCCG TGCACGGGTA CCCGGTCGTC CCGGCCCAGC CCGCCTCCCA CGGGTGCGCC
CGGGTGAGCC TGGCCGCGAT GGACTGGCTC TGGGAGAGCG GCAACATCGA CGTGCACACC
ACCGTCCTGG TGCGCTGA
 
Protein sequence
MATPRFLLTP HPKHTLLLAV AAAFALILGT VVAAPAAHAA PTSVSTGPEL RQGSSGAGVS 
AVQERLAELG YWIDGVDGQF GFHTEQAVVA LQKAAGIARD GVVGPATRAA LAEGVLPEAQ
STSGDLLEID LDRQLLLVVS GGEVERVLNT STGSGQPYES SDGTERIATT PTGTYTVFRE
VDAWDPGPYG ALYRPKYFNG GIAVHGYPVV PAQPASHGCA RVSLAAMDWL WESGNIDVHT
TVLVR