| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4697 |
|---|
| Symbol | |
|---|
| ID | 9248579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5575567 |
|---|
| End bp | 5576889 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_003682589 |
|---|
| Protein GI | 297563615 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0177316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.674112 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA GTGACGAGGC GGCGGCGGTT CTCGATGCGG TCCGTGAGCA CCACCGGTCC
ACCCGCACCG AACGCGAGTT CGTTCCGGGT GTGACGGAGA TCTGGCCCTC CGGGGCGGTC
CTGGACGAGG AGGACAGGGT GGCCCTGGTC GCGGCCGCCC TCGACATGCG CATCGCGGCG
GGCCCCAGCG CACGCCGCTT CGAGTCCGCG TTCGCCCGCA GGCTCGGAAG GCGCAAGGCC
CACCTCACGA ACTCCGGCTC CTCGGCCAAC CTGCTCGCGC TGTCCTCCCT GACCTCGCAC
CTGCTGGAGG ACCAGCGGCT GCGCCCCGGC GACGAGGTCG TCACGGTCGC CGCCGGGTTC
CCGACGACCG TCAACCCGAT CCTCCAGAAC GGGCTCGTGC CCGTGTTCGT GGACATCGAG
CTGCGCACGT ACAACACCAC GGTCGAAAGG GTGGAACGGG CCATCGGCCC CCGTACCCGG
GCGATCATGA TCGCCCACGC GCTGGGCAAC CCGTTCGAGG CGCGGGAGAT GGCGCGCCTG
GCGGAGGAGC GCGACCTGTT CCTGATCGAG GACAACTGCG ACGCCGTGGG CTCCCTCTAC
GACGGGCAGG TGACGGGCTC CTTCGGCGAC CTGTCGACGG TCAGCTTCTA CCCGGCGCAC
CACCTCACCA TGGGCGAGGG CGGCTGCGTG CTCACGTCCA ACCTCATGCT GGCCCGTGTG
GTGGAGTCCA TGCGCGACTG GGGGCGGGAC TGCTGGTGCG AGCCCGGTGA GAGCGACACC
TGCCGCAAGC GCTTCAGCTA CCAGCTCGGG ACCCTGCCCC CCGGCTACGA CCACAAGTAC
ACGTTCTCCC ACGTGGGCTA CAACCTGAAG GGGACCGACC TCCAGGCGGC GCTCGGGCTG
AGCCAGCTCG ACAAGCTCGA CTCCTTCGGC GAGGCCCGGC GCCGCAACTG GCGCCGGATG
CGGGAGGGGC TGGACGGGCT TCCGGGCCTG ATCCTGCCGG AGGCCACGCC CAACAGCGAT
CCGAGCTGGT TCGGCTTCGT GGTCACCGTG GACCCCGGGG CGCCGTTCGA CCGGGCCGAG
CTGGTCCACT TCCTGGAGTC CCGGCGGATC GGCACCCGCC TGCTCTTCGC GGGCAACCTG
ACCCGGCACC CCGCCTACCT GGACCGGCCG CACCGCGTGT CCGGAGAGCT GGAGAACAGC
GACATCGCCA CGGAGCGGAC CTTCTGGACC GGGGTCTACC CCGGGCTCAC GGACGAGATG
ATCGACTACG TGGTCTCCTC GGTCACCGAG TTCGTCAAGG AGCGGCACAA GGGCGTCTTC
TGA
|
|---|
| Protein sequence | MATSDEAAAV LDAVREHHRS TRTEREFVPG VTEIWPSGAV LDEEDRVALV AAALDMRIAA
GPSARRFESA FARRLGRRKA HLTNSGSSAN LLALSSLTSH LLEDQRLRPG DEVVTVAAGF
PTTVNPILQN GLVPVFVDIE LRTYNTTVER VERAIGPRTR AIMIAHALGN PFEAREMARL
AEERDLFLIE DNCDAVGSLY DGQVTGSFGD LSTVSFYPAH HLTMGEGGCV LTSNLMLARV
VESMRDWGRD CWCEPGESDT CRKRFSYQLG TLPPGYDHKY TFSHVGYNLK GTDLQAALGL
SQLDKLDSFG EARRRNWRRM REGLDGLPGL ILPEATPNSD PSWFGFVVTV DPGAPFDRAE
LVHFLESRRI GTRLLFAGNL TRHPAYLDRP HRVSGELENS DIATERTFWT GVYPGLTDEM
IDYVVSSVTE FVKERHKGVF
|
|---|
| |