Gene Ndas_4681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4681 
Symbol 
ID9248563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5554457 
End bp5555293 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003682573 
Protein GI297563599 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.52911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATAGCCACCA GGTACTCGCC AACCATCAGA CGACGTCGCC TGTCCGCTGA TCTGCGACGC 
ATCCGCCAAG CCGCGCGCAT GACCAGTGAG GAAGTCGCGA AGGCCGCCGA GCTGTCCAAG
TCGACGTACT CCAACATCGA GTCCGGCCTC AAGCAGCGCC CGAAGCTCCC GGAAATCCGC
GCCATCCTGA ACGCCTGCGG GCTGTCACCC GGCCGCGAGT ACGAGGAGAT CCTCGACCTG
TGCCGCCAGT CCCTCGAACG CGGCTGGTGG AACCGGTACC GAGACGTCCT GGCCGCGAGA
TACGTGGGCT TCGAGACCGA GGCCAACGCG ATCTCCACGT GGGAACCTGT GGTCCTGCCC
GGCCTGCTCC AGGTGCCGGG ATACATGGAG GTCATCGCCC AGGCCGCGCT GTTGCGGCCG
GAGGACATCC ACCGCATCGT TGACGTGCGG ATGACCCGAC AGCGCATCCT GGACGACGAG
GACGCACCAG AACTGTGGGC CATCTTTGAC GAGACCGCGC TTCTGAGGCT GGAGCAGCAC
CCGATGGTGC GTCAGGAGCA GGTCCGGCAC CTGCTGGACA TGGCCGAGCG CCCGAATCTG
ACCCTCCAGA TGACACGCGC GTCCCAGCTC AACGCGGGAA GCGGAGGTCC CTTCGTCATC
TTGGAGTTCC CCGAATCGGT CGACCCCACG GTGGTCTATT TGGAAACGAA CACCGATGGA
ATCTACTTGG AGGAGCCCGA CGAGGTCGCC CGCTACAGAA ACCTGATGAA CCACCTACGC
CTGGCCGCTC TCCGTCCCGG CGAGACGATC GACCACCTTC GACAGATGAT CGAGTAG
 
Protein sequence
MATRYSPTIR RRRLSADLRR IRQAARMTSE EVAKAAELSK STYSNIESGL KQRPKLPEIR 
AILNACGLSP GREYEEILDL CRQSLERGWW NRYRDVLAAR YVGFETEANA ISTWEPVVLP
GLLQVPGYME VIAQAALLRP EDIHRIVDVR MTRQRILDDE DAPELWAIFD ETALLRLEQH
PMVRQEQVRH LLDMAERPNL TLQMTRASQL NAGSGGPFVI LEFPESVDPT VVYLETNTDG
IYLEEPDEVA RYRNLMNHLR LAALRPGETI DHLRQMIE