Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4681 |
Symbol | |
ID | 9248563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5554457 |
End bp | 5555293 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | transcriptional regulator, XRE family |
Protein accession | YP_003682573 |
Protein GI | 297563599 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.52911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATAGCCACCA GGTACTCGCC AACCATCAGA CGACGTCGCC TGTCCGCTGA TCTGCGACGC ATCCGCCAAG CCGCGCGCAT GACCAGTGAG GAAGTCGCGA AGGCCGCCGA GCTGTCCAAG TCGACGTACT CCAACATCGA GTCCGGCCTC AAGCAGCGCC CGAAGCTCCC GGAAATCCGC GCCATCCTGA ACGCCTGCGG GCTGTCACCC GGCCGCGAGT ACGAGGAGAT CCTCGACCTG TGCCGCCAGT CCCTCGAACG CGGCTGGTGG AACCGGTACC GAGACGTCCT GGCCGCGAGA TACGTGGGCT TCGAGACCGA GGCCAACGCG ATCTCCACGT GGGAACCTGT GGTCCTGCCC GGCCTGCTCC AGGTGCCGGG ATACATGGAG GTCATCGCCC AGGCCGCGCT GTTGCGGCCG GAGGACATCC ACCGCATCGT TGACGTGCGG ATGACCCGAC AGCGCATCCT GGACGACGAG GACGCACCAG AACTGTGGGC CATCTTTGAC GAGACCGCGC TTCTGAGGCT GGAGCAGCAC CCGATGGTGC GTCAGGAGCA GGTCCGGCAC CTGCTGGACA TGGCCGAGCG CCCGAATCTG ACCCTCCAGA TGACACGCGC GTCCCAGCTC AACGCGGGAA GCGGAGGTCC CTTCGTCATC TTGGAGTTCC CCGAATCGGT CGACCCCACG GTGGTCTATT TGGAAACGAA CACCGATGGA ATCTACTTGG AGGAGCCCGA CGAGGTCGCC CGCTACAGAA ACCTGATGAA CCACCTACGC CTGGCCGCTC TCCGTCCCGG CGAGACGATC GACCACCTTC GACAGATGAT CGAGTAG
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Protein sequence | MATRYSPTIR RRRLSADLRR IRQAARMTSE EVAKAAELSK STYSNIESGL KQRPKLPEIR AILNACGLSP GREYEEILDL CRQSLERGWW NRYRDVLAAR YVGFETEANA ISTWEPVVLP GLLQVPGYME VIAQAALLRP EDIHRIVDVR MTRQRILDDE DAPELWAIFD ETALLRLEQH PMVRQEQVRH LLDMAERPNL TLQMTRASQL NAGSGGPFVI LEFPESVDPT VVYLETNTDG IYLEEPDEVA RYRNLMNHLR LAALRPGETI DHLRQMIE
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