Gene Ndas_4646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4646 
Symbol 
ID9248527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5519541 
End bp5520059 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003682538 
Protein GI297563564 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGGGA CGACCCGGAC GCCCCGGTAC GACGAGTTCA GCCACTACGT GGCCGAACGC 
GGACCGGTCC TGCTCCGGAT GGCCCGGTCG CTGACGGGCA GCCACGCCGA CGCCGAGGAC
CTGCTCCAGG CGGCGCTGGT CAAGACCTTC CTCGCCTGGG ACCGGATCAC CAACCCGAAG
GCGCGCGACG GGTACGTGCG CAGGGCCATG GTGAACACGC AGATCTCCGA GTGGCGGCGC
AACCGGCTGG ACGTCTACCC GACCGACGAG ATCCCCGAGC AGCGCGTGGA CGACCCCACC
TGGCGCAGCG ACCTGGCCGA CGTGGTGGAG CGCGCCATCG ACCGCCTGCC CGCCCGGCAG
CGGACCACGG TGGTGCTGCG CTACTACGAC GACCTCACCG AGGCGCAGAT CGCCGAGCGG
ATGGGGGTGA CGCTCGGCAC GGTGAAGAGC ACGCTGTCCC GCGCCGTGGA CAAGCTGCGC
CTGGACGCCG ACCTCATCAT CGAGCGCACC GTCGGCTGA
 
Protein sequence
MTGTTRTPRY DEFSHYVAER GPVLLRMARS LTGSHADAED LLQAALVKTF LAWDRITNPK 
ARDGYVRRAM VNTQISEWRR NRLDVYPTDE IPEQRVDDPT WRSDLADVVE RAIDRLPARQ
RTTVVLRYYD DLTEAQIAER MGVTLGTVKS TLSRAVDKLR LDADLIIERT VG