Gene Ndas_4606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4606 
Symbol 
ID9248487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5464460 
End bp5468245 
Gene Length3786 bp 
Protein Length1261 aa 
Translation table11 
GC content73% 
IMG OID 
ProductNB-ARC domain protein 
Protein accessionYP_003682498 
Protein GI297563524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.350947 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.437049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAAC TGTCGCACAG GTATCGCAAC GTACTCGACA ACCTGACAGG CGGACCGTCC 
CGCCTGGCCG TCCTCGTCGA CTCCTCCCCC CTGATGGGCC TGCACACGGC CGGCGTCGCG
GCCCTGACCG GGGAGGCCGA GCGGGCGGGG GCCACGGTCG TCCGCTTCCA CCCCGGCCAC
GCCGTGCACG CGCCGCAGCT CGGCGGCGCC GAGGCGGCCG TCCTCGTCAC CGACACCCTG
GACCGGAGCT GGCGCCAGCC GAGGCTGCGC GCCTGGATCG CCGAACTCGC CGCCCGGCTC
CCCACCGCCG TCCTGCACCT CCTGGACCGC TCCGTGTGGC CGGAGGGCCC GCTCACGCCG
CGACCGATGC GCATGACGGC CCCGTTCCCC GCCTCCCCCG CCTCGTGGGC CTTCGCGCGC
GCCCCGGACG AGGCCTCCGC CCCCGGCCTC CCTGCGGACG CGGCGGTGCT GCCGGTTCTG
GAGTGCGAGC CGGAGGCCCT CGCGGAGTGG GCCTCGGTGG TGGACGGCCG ACCGGGCGCG
TGGGAGGCCG ACGTGTGCGT CCTCCCGCCC GGCGGCGCGC GCCCGCCCAG CGCCGTCCCC
TGGGAACCCG ACCCGGTGTC GCGCTTCCTG TCCCACGCCT CGCGCGGGGC CCGCGAGCTC
GCGGTACGCC TCACCCAGGC GCCCGTCAAC CTCCCCGTCG CGGAGCTGAT CCAGCGCAAC
ATCCCCCACG CGCCCCGCGA CGGACGCCTC GCCGTCACCG AGATCGCCGA GGTCTTCGGC
GGCGAGCTGA TGGACCCGAC TCTGCCGCCC GGCGACCTGC ACGACCCGGC CGCCACCGCC
CTGGAGTTCC TGCCCGGGGT CCGCAGGGAC CTGCTCGGCA GGTTCGGCGA CCTCAGCGTC
ATGCGGTCGG TGTACTACTC GCTGGGCATC GAGTTCAAGG ACTCCGCACG GATCTACCAG
TGGCTGGCCC GGATCGAGAC CGGAGCCCCC CTCGTGCCCT CGCTCGACGG GGAGGAGGGC
CTGGCCGCGG CCGTGCTCCC CGCGCTGTCC GAGATGCCCG GCGAGTACCG CCGCTTCGCC
GGGCACCTGC GCGCCGCGCT GGAGGGGGAC TCCGCCCCCG CGGTCCCGGG CGGCGCCACC
GCTCCCTCCG CCACCGACCG CCGCACGCCC GCCGCCCCCC GAGAGGAACC GAGTCCGACC
GTGACCGACA CCCGCGCCTC CGAGACCGAA TCCGCCCCCT CGGAGCCCAC CATCCCGCGC
TCCCGGAGGC GCCAGTCCCG GACCCGGCCC CTGGCCAAGC TCCGCGGCGT GCCTCCGCAC
AACCTCAACT TCACGGGGCG CGAGAAGATC CTCGAACGCG TCCACGGTCT GCTGGAGGAG
TCCTCGGGCG GGATCTACCT GCTGTCGGGC GGGGGCGGCA TCGGCAAGAC CCAGATCGCC
ACCGAGTACG CGCACCGGTA CCGGGACAGC TACGACCTGA TCTGGTGGGT CCCCGCCAAC
AGCCCCGCCG ACATCCAGCA GTCCTACATG CACCTGGCCC GGCACCTGGG CCTGGCCGAG
GACGGCGGCA ACCTGGAGAA GACCGCCCAG CGCGTCCGGG ACGTGCTGGA GAGCGACCCC
GAGGTGGGGC GCTGGCTCCT CATCCTGGAC GACGTCTCCA ACCTGGACCA GCTGGGTGGG
GGCGAACTTC CGACCGACGG CCCCGGCGAC ATCATCATCA CCTCCCGCGA CCAGAGCTGG
ATCCCCAGCG GGCGCAGCGA GGGTTCGGTC GTGCCGAGCC TGACCCCGCA GGAGAGCGTC
GCGCTGCTCC GCAAGGTCTG CCCCCAGGGG CTGGAGGACG ACGATGACGC CCTCCGGATC
GCCGAGCGCC TGGAGCACCT GCCCCTGGCG CTGGCGCAGG TCGGCGCCTA CCTGCGCGAC
TCCCTGATGA GCGTCGAGGA CTTCCTCCAG CTGATCCAGG ACAAGTTCGA CGACCTGGTC
ACGCACGTGG AGTCGGAGGA CCTGTACCCC CTGCCGCTGG CCGCCGCCTG GAACATGCAG
CTCGACGACC TGAGGCGCGG CACCGGGGGC GACCGCGCGC TCAAGCGGAT GGTCCGCGAG
TTCGTCCAGC TGTGCTCGTT CTTCGGCCCC CGCCCGCTGG CGCGCACCCT CTTCCACCGG
GCCCGGGGCC TGAGCGCCAA CCCCGAGCTG GCGCAGATCC TGGGCAACGA GATGGCCCTG
TCCCGGGTGC TGCGCTACGT GAGCAGGCAC AGCCTCGCCG AGTTCGACCG GTCCAAGCAC
ACCTTCCAGA TGCACGTCAC CTTCCAGACC GTCGTGCAGA GCACGCTCGG CGACGAGGAG
CGGGTGCGCT ACCGGGACCT GGCCCACCGC CTGCTGGCGC AGAGCGACCC CCTCGGCCCC
GAGCTGCCGC AGAACTGGCC CGAGTACCAG CTGCTGCTGA CCCACGTGAC CGCCTCCGAG
GCGTGGCGCA GCCACGACCC GCAGGTCCGC GGCCTCGTCC ACAACGTGAT CGTGTACCTG
GTGGAGACGG GCAACGACGA CGCGACGCTG GAGCTGGCGG ACCGCGCCAT CGAGGCCTGG
TACGACGACA TCCCGCAGCG GTTCCAGGTC CAGCTGCTGC GCGCCAGGGT CCTGCGCCTG
CGGGGCGACA ACGAGGTCGC CCTCGCCGAG GCGGAGCGGA TGTACGCCGA GCAGTCGGAG
CTGGAGGGCC CCGAGAGCGA GGAGGCCCTG GAGGCGCGGC GGGCCCGGGC CATCGCGCTG
AGCAACCTCG GCCACTACGA CGAGGCCCTG GCCATGTTCG AGGACATCCA CCGGACCAGG
ACCGCGCTGT TCACCGAGGA CGACGAGAAC ACCCTGGTCA TCGCGCACGA CATCGGGGAC
TGCCTGCGCC GTCTGGGCCG CTTCCAGGAC GCCCTGGACC TGGACCGCCG CACCCTCGAA
CAGCGCAAGT ACCTGTTCGG GTCGAACGGC ATCCCGACCC TGCGCTCCCG GCTGTCGGTC
GGACTCGGCC TCATGGCCCT CGGACACCTG GAGGAGGCCC GGGAGGCCCT GGAGGACTGC
CAGCGGCGCT TCGAGGCCAC CGAGGCGGAC GCCAGCGCGC ACACCTCGGA GATCCCGATC
TTCCTCTCCG TGGTCAACCG CAGGCTCGGC GCCCACGGGT CGGCCCTGGA ACTGTCCCAG
CGGGCAGTGG ACGCCAACAC CTCGCGCCAC CGGCCGCACT CCCGGGTGAC ACTGCACGTC
AACAGCATCC ACATGGTGAA CCTGGCCTTC GCCGAGCGGG TGGCCGAGGC CAAGAGCCTG
GCCGACGACC TCCTGGAGCA CATGGACGCC GTGTACTCCG GCCGCCACCT CTTCCCGTGG
GCCTCACGGG CCAACGCGGC GATCGTGCTG CGGATGGCGG GCGAGTACGA GCGGGCGTAC
GCGCTCGACG TCGAGGCCCG GCAGGAGATC CTGCGGCTCT TCCCGGACGC GCGGATCACC
GTCGCCGCGG TCGAGGTGAA CCTGGGCAGC GACCTGTTCG CCCTGGGGCG GCTCAAGGAG
GCCCGGGCCC AGGACGCGGC CAGTGTGGAG CTGTGCCGGG AGGTCCTCGG CGAGCACAAC
CTCTTCCTGA CCACCGCCCG GCGCAACCTG CTGATCAGCC GCCGGGCACT GGGCGAGGAC
GTCCGGGAGG AGTGGGCGGC CCTGCGCGAC CACTACACCG CCCGGTTCGG CCCGGACCAC
CGGTTCGTGA CCACGATGGC GGAGTACGCC CGGCTGGACA CCGACATCGT CCCGGTCCGG
ACCTGA
 
Protein sequence
MDELSHRYRN VLDNLTGGPS RLAVLVDSSP LMGLHTAGVA ALTGEAERAG ATVVRFHPGH 
AVHAPQLGGA EAAVLVTDTL DRSWRQPRLR AWIAELAARL PTAVLHLLDR SVWPEGPLTP
RPMRMTAPFP ASPASWAFAR APDEASAPGL PADAAVLPVL ECEPEALAEW ASVVDGRPGA
WEADVCVLPP GGARPPSAVP WEPDPVSRFL SHASRGAREL AVRLTQAPVN LPVAELIQRN
IPHAPRDGRL AVTEIAEVFG GELMDPTLPP GDLHDPAATA LEFLPGVRRD LLGRFGDLSV
MRSVYYSLGI EFKDSARIYQ WLARIETGAP LVPSLDGEEG LAAAVLPALS EMPGEYRRFA
GHLRAALEGD SAPAVPGGAT APSATDRRTP AAPREEPSPT VTDTRASETE SAPSEPTIPR
SRRRQSRTRP LAKLRGVPPH NLNFTGREKI LERVHGLLEE SSGGIYLLSG GGGIGKTQIA
TEYAHRYRDS YDLIWWVPAN SPADIQQSYM HLARHLGLAE DGGNLEKTAQ RVRDVLESDP
EVGRWLLILD DVSNLDQLGG GELPTDGPGD IIITSRDQSW IPSGRSEGSV VPSLTPQESV
ALLRKVCPQG LEDDDDALRI AERLEHLPLA LAQVGAYLRD SLMSVEDFLQ LIQDKFDDLV
THVESEDLYP LPLAAAWNMQ LDDLRRGTGG DRALKRMVRE FVQLCSFFGP RPLARTLFHR
ARGLSANPEL AQILGNEMAL SRVLRYVSRH SLAEFDRSKH TFQMHVTFQT VVQSTLGDEE
RVRYRDLAHR LLAQSDPLGP ELPQNWPEYQ LLLTHVTASE AWRSHDPQVR GLVHNVIVYL
VETGNDDATL ELADRAIEAW YDDIPQRFQV QLLRARVLRL RGDNEVALAE AERMYAEQSE
LEGPESEEAL EARRARAIAL SNLGHYDEAL AMFEDIHRTR TALFTEDDEN TLVIAHDIGD
CLRRLGRFQD ALDLDRRTLE QRKYLFGSNG IPTLRSRLSV GLGLMALGHL EEAREALEDC
QRRFEATEAD ASAHTSEIPI FLSVVNRRLG AHGSALELSQ RAVDANTSRH RPHSRVTLHV
NSIHMVNLAF AERVAEAKSL ADDLLEHMDA VYSGRHLFPW ASRANAAIVL RMAGEYERAY
ALDVEARQEI LRLFPDARIT VAAVEVNLGS DLFALGRLKE ARAQDAASVE LCREVLGEHN
LFLTTARRNL LISRRALGED VREEWAALRD HYTARFGPDH RFVTTMAEYA RLDTDIVPVR
T