Gene Ndas_4589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4589 
Symbol 
ID9248470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp5440332 
End bp5441618 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content69% 
IMG OID 
ProductHNH endonuclease 
Protein accessionYP_003682482 
Protein GI297563508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGCAG CGCACGAGGC GGCCCCCGGG GAATGTTCCC CGGCCGTGGC CGCGCTGGCC 
GGTGCGCGCG AGATCATCCA CCAGGCGTTG AACGCCGAAG TGCCGCCCGG GGCCGATGAG 
GCCGCCGCTG AGGAGATCGC GGCGCTGTGG GCGCAGCTGG ATCAGATCCG GTATCAGGCG 
TTGGCGCAGA TGGCGCGCCT GTACGCGCGC GGTGAGGTCG CCCGCTACAG CGGCTACTCC 
ACGCTGGACA AGTGGTTGGT GCACCACGGC ACGATGCCCA CCGCTCAGGC CAAGGATTTG 
GCTCGTTTGG CCCAGCACGT GCAGGAGGAG ACGCTGCCCG CCACTGCCCA AGCAGTAGCT 
GAGGGCAGGG TGGTGTTGGG TGAGGCGGTG GCGATCGCCA AGGCCACCGA CAAAGCCGTC 
CAGACCCGCG ATGAGGACCA CTTTCCCGAT GAGGGGGAGT ACCGGCACGG GTTTGAGTCC 
GCCCTGGTGG CCGCGAAGGC GGAGCGGCCT GCGTTGTCGG TCAACCAGCT CCAGTCGGTG 
GCCCGCCAGG TCGCCTACCG TTTGGACCCC CACCGCCTGG ACCGCGACCA CGAAGCTGCT 
CACGCGGCCC GCGGGCTGAC GGTGCATGAC ACGTTCCAGG GCAGCTACCA GCTCCAGGCC 
TGGGGTGGGT CTGGGGATGC GTTGATCGTG CGCGCGGCCA TCGACACCTT CACCACCCCA 
TCCGGGGAAG GTGACACCCG GTCCCGGTCC CAGCGTGAGC ACGACGCGCT CATCGCGGCG 
CTGCGTTTCG CCACCACCCA CACCGGATGC GCCAACGCTC CGGCTCCATT GGCGCAGATC 
CGCATCGTGG TGCCCGTGCA GACCTACCTG GACGCCCAAG GCCAGGAGGT TCCGGCGTTG 
GACGAGCACG GTCGAGTGAT TCCGGTCGGG CTGGTCCACG AACTCGCCGC CGATTCCGAG 
GTGGTGCGGA TGCTCACCGC ACCCCCCACC GGACAGGTGC TGGATGTGGG CCACAGCCGC 
CGCCTGGCCT CAACCCGCCA ACGCACCGCC GCCTTCCACG GACACGCCAC CTGCGCCCAC 
CCGGGCGGAT GTGAGGTACC GGTGGCGTTG TGCCAAGCCG ACCACGTGCA GTCGTTCTCC 
CGAGGAGGGC GCACGGTGGT CGCCAACCTC CAACCGCTGT GCGGGCCGCA CAACCGGGCC 
AAGTACCAAC GCGAACTGCG CACACACCGA CAGCAGGAAC GGCACCATCC GCCCGACAGG 
ATTCCGGTTC CCCCACCCCG AAAATGA
 
Protein sequence
MIAAHEAAPG ECSPAVAALA GAREIIHQAL NAEVPPGADE AAAEEIAALW AQLDQIRYQA 
LAQMARLYAR GEVARYSGYS TLDKWLVHHG TMPTAQAKDL ARLAQHVQEE TLPATAQAVA 
EGRVVLGEAV AIAKATDKAV QTRDEDHFPD EGEYRHGFES ALVAAKAERP ALSVNQLQSV 
ARQVAYRLDP HRLDRDHEAA HAARGLTVHD TFQGSYQLQA WGGSGDALIV RAAIDTFTTP 
SGEGDTRSRS QREHDALIAA LRFATTHTGC ANAPAPLAQI RIVVPVQTYL DAQGQEVPAL 
DEHGRVIPVG LVHELAADSE VVRMLTAPPT GQVLDVGHSR RLASTRQRTA AFHGHATCAH 
PGGCEVPVAL CQADHVQSFS RGGRTVVANL QPLCGPHNRA KYQRELRTHR QQERHHPPDR 
IPVPPPRK