| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4578 |
|---|
| Symbol | |
|---|
| ID | 9248459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5423899 |
|---|
| End bp | 5425071 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | VWA containing CoxE family protein |
|---|
| Protein accession | YP_003682471 |
|---|
| Protein GI | 297563497 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.26752 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TGGACGAGCG GGAGCGCCGC TGGAGGCTCG TGCTGGGCCG GGAGGCGCAG
TGCTCCGGCG GGGTCGGCGC CTCCGGCCTC AGCGCCGCCG ACCAGGGGAT GGACGGGGCC
CTGGAGGCGC TCTACGACAG CGTCGGCCCC GGCAGGACCA GCGCCCAGCG CTCCGCAGGG
CTCGGCGGCT CGGCGCCCCG CGTGGCGCGC TGGCTGGGCG ACATCCGCGA GTACTTCCCG
TCCTCCGTGG TGCAGGTGAT GCAGAAGGAC GCCATGGACC GGCTGGGGCT GCACCAGCTC
CTCCTGGAGC CGGAGATGAT GGAGGCCGTC GAGCCGGACG TGCACCTGGT GGGAACCCTG
CTGTCCCTCA ACCGGGTGAT GCCCGACCAG GCCCGCGAGT CGGCCCGCGC GGTGGTGCGC
CGCGTGGTGG ACGACCTGGA GCGGCGCGTG GCGCAGAAGA CGCGGTCCCT GGTGCAGGGG
GCGATCGACC GGTCGTCCCG CACCCACCGG CCGCGCCGGG TGGCCGACAT CGACTGGAAC
GCCACCATCC GCCGCAACCT GGCCCACTAC CTGCCCGAGC ACAACACGAT CGTGCCGCAG
ACCCTGGTGG GGTACGGCCG CCGCAGCCGG GGCGTGCAGA AGGACGTGGT GCTGGCGATC
GACCAGAGCG GTTCGATGGC CTCCTCGGTG GTCTACGCGA GCGTGTTCGG CGCGGTGCTG
GCCTCGATGA AGACCCTGCG CACGTCGCTG GTCGTGTTCG ACACCGCGGT GGTGGACCTG
ACCGAGCAGC TGACCGACCC GGTCGAGGTG CTGTTCGGCA CGCAGCTGGG CGGCGGCACG
CACATCAACA AGGCCATCGC CTACTGCCAG GGGCTCATCA CCAAGCCGAA CGACTCGGTC
TTCGTGCTGA TCAGCGACCT GTACGAGGGC GGTGTCCGAG CGGAGATGCT GAGGAGGGTG
GCCGCGATGC AGGCGGCCGG GGTCCAGGTG GTGGTGCTGC TGGCGCTGTC GGACGAGGGC
GCGCCGTTCT ACGATCGACA GAACGCGTCC GCGCTCGCCG AGATGGGGGT GCCCGCGTTC
GCCTGCACCC CCGACATGTT CCCCGAGCTG ATGGCGGCGG CCATCCAGGG GCAACCCCTC
ACGTCCTGGG TCGAGAAGCA CCAGGACGCC TGA
|
|---|
| Protein sequence | MNAVDERERR WRLVLGREAQ CSGGVGASGL SAADQGMDGA LEALYDSVGP GRTSAQRSAG
LGGSAPRVAR WLGDIREYFP SSVVQVMQKD AMDRLGLHQL LLEPEMMEAV EPDVHLVGTL
LSLNRVMPDQ ARESARAVVR RVVDDLERRV AQKTRSLVQG AIDRSSRTHR PRRVADIDWN
ATIRRNLAHY LPEHNTIVPQ TLVGYGRRSR GVQKDVVLAI DQSGSMASSV VYASVFGAVL
ASMKTLRTSL VVFDTAVVDL TEQLTDPVEV LFGTQLGGGT HINKAIAYCQ GLITKPNDSV
FVLISDLYEG GVRAEMLRRV AAMQAAGVQV VVLLALSDEG APFYDRQNAS ALAEMGVPAF
ACTPDMFPEL MAAAIQGQPL TSWVEKHQDA
|
|---|
| |