| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4550 |
|---|
| Symbol | |
|---|
| ID | 9248431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5391966 |
|---|
| End bp | 5393339 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | integral membrane sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003682443 |
|---|
| Protein GI | 297563469 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.193979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCTCA CCGGCCGGGT GGTCCTGCGG TCGCTGCTGG TCATGGCCCT GGTCATCGGC
GGTGTCGCCC TGCTCACCTA CGAACTGGTG CGCGTGTCGG GCCTGGCCGA CATCGACCAC
CTGCTGCGCG AGGAGTCGGC GCTGGTCGGC GACGCCCTCG ACGGGCGGCT GCCCGCCGCC
GCCGGACTCG ACGGCGTGGT CTCGGGCCCG GAGGCCGAGC GCGCCGCCCG CCAGGCGCTC
GCCGTACGCC CCAGCGGAGC CCGCCACGTG ACGCTGGTGA CCGTCAACGA CGTGCGGTTG
CAGAGCACCG GGGGCCCCTC GCGCGTCGCG GGCCTCATGC GCGGCGGCGA CGCCCCCGGG
CCCGAACCCG GGACCCTGCG CACGCTCGAC ACCGACGCGG GCCCGCTCCG GGTGCTCGAC
ACCCGGGTCG TGGACGACGC CGGTGACACC CTGGCCGTGG TCACCGTCGC CGCCCCGCTC
GACTCCACCC GGGACGCGGC GGCCACCGTC CTGCTGTGGG CCGGTCTCGC CGGGGTGATC
GGCGTGGTCG GCGGAGGGGT CGTGCTGTGG CTGGTCGTGC GGCGCACCCT GGGTCCCGTG
CGGGAGGTCT CCGACGCCGC CAAGGCCATC TCGCCGGCCG ACCTCGCCAC CCGCGTCCCG
GTGCCCGCCA CCCGCGACGA GATCGCCGAA CTGGCCACCG AGATCAACCA GATGCTGACC
CGCATCGAGC AGGCCGACAG CAACCGGCGC CGGTACCTGG CCGCGATCTC CCACGAGGTG
CGCACCCCTC TCTCCGTCGC CGAGGGGCAC CTGGAACTGC TGGGCACCGC GGAGGCGGCG
GTGGTGCGCG CCGAACTCGG CCGCCTGCGC CGTGTGCTGG AGGACCTCAT GGCGGTGGCC
CGCGGCGGCG ACGAGATCGA CGTCCGCGTC GAGGCCGTGT TCCTGCCCGA CCTGTTCCAC
GACGTGCGGG CCCGGCTCGA CGCCCTGCCG CACGCCGACG CCGTCACCCT GGAGGAGCCG
CCGCCGGACG TCCTGCTCGG CGACCAGTCA CGCCTGGAGC AGTGCCTGGC CAACCTCACC
GCCAACGCCG TCGACCACAA CCCGCCCGGC ACCCGCGCCA CCGTGACCGC CCGCGGAGGC
GAGGACACGA TCACCCTCAC CGTGACCGAC GACGGCCCGG GGATCAGCGC CGAGGTGCTC
CCCCACGTGT TCGAACCGTT CGTCACCACG CGCACCACCG GATCGGGGCG CACCTCGGGG
CTCGGCCTGT CGGTCGTGCG CTCCCTGGTC GAGGCCCAGG GCGGTGAGGT GGGCATCGAC
AGCGGCCCCT CCGGCACCGT CGTCACGATC ACCCTCCCGC GTGCCACGCC CTGA
|
|---|
| Protein sequence | MSLTGRVVLR SLLVMALVIG GVALLTYELV RVSGLADIDH LLREESALVG DALDGRLPAA
AGLDGVVSGP EAERAARQAL AVRPSGARHV TLVTVNDVRL QSTGGPSRVA GLMRGGDAPG
PEPGTLRTLD TDAGPLRVLD TRVVDDAGDT LAVVTVAAPL DSTRDAAATV LLWAGLAGVI
GVVGGGVVLW LVVRRTLGPV REVSDAAKAI SPADLATRVP VPATRDEIAE LATEINQMLT
RIEQADSNRR RYLAAISHEV RTPLSVAEGH LELLGTAEAA VVRAELGRLR RVLEDLMAVA
RGGDEIDVRV EAVFLPDLFH DVRARLDALP HADAVTLEEP PPDVLLGDQS RLEQCLANLT
ANAVDHNPPG TRATVTARGG EDTITLTVTD DGPGISAEVL PHVFEPFVTT RTTGSGRTSG
LGLSVVRSLV EAQGGEVGID SGPSGTVVTI TLPRATP
|
|---|
| |