Gene Ndas_4547 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4547 
Symbol 
ID9248428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5389225 
End bp5390190 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content76% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003682440 
Protein GI297563466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGACC CGAGCCGATG GGAAACCGGC CTGCCCGCCC TCGTGCTGGC CGCCGCCGCC 
CTGCTCGGCG GCGCGGCGGG TCTGCTGATC GCGCCCCACG CCGCCGCCGT CGTCCTGGCC
TCGACCCTCG TGCAACTGGG CGCCACCGCG CTGGGCTGGC GGCTCACCGG CCGTTCCGCG
GTGGTGACCG GCGTGGTCGC GGTCGTGACC CTGGGCATCG CCCTCGAACC CACTCTCCGC
GAACTGCTGC GGCTGGGCGC GGTTCCCTGG ACCGTCCTGG CGCTCGCCTT CGGCACCCTC
AACCTCGTGC GCCGGGCCCG GAGCACGACC GAGCTGGTGT CCGGTGTGGC GCTGTCGTCG
GCGGCCGCGG CCGTGTCGGC GGTCGTCACC GCGCAGGGCG GAGCCCCCCT GGTGCCGAGC
CTGCTCGCCT CGTCGGTTCC GGTCCTGGGC GGTGCCCTGG TGGCCACCGT GCAGCGGCTC
AACGAGGCAC GCCGGGACAG GCTGTCGCGC CCCGTCGTCC CGCCGATCTC GACCGGAGCC
GACACGGGGG ACGCCCGGCA GGCGCTTCTC CTGGTGGCGC TGCGGGCGGA GAGCATGTTG
ACGGCCGCGC GCGACGCGAC CGCCGCGGCC CAGGCACGCG ACCTGCGCAC GGTCGCACTA
CAGGGGCTCA ACGTGCCCGG CGCCGCCTCC GGGCCGAGGC TGACCGTGCG CATCGACGTG
GCGGCCGCCG GAGCGGAGGG GGAACAGGAG GCCCCCGAAC CCGACAGGGT GGAGACGCCG
GCCCTGTCGG AGCGCGAGGG CGAGATCGCG CGCCTGCTGA CCACGGGCGC CTCCAACGCG
CGGATCGCCC GCGAGCTCTA CCTGAGCGAG GCCACCGTCA AGGGGCACGT GTCCCGGATG
ATGCGCCGTT TCGACTGCGG CAACCGCACC CAGCTCGCCC TGATGGCCGC CCGGTGGTTC
GGCTGA
 
Protein sequence
MTDPSRWETG LPALVLAAAA LLGGAAGLLI APHAAAVVLA STLVQLGATA LGWRLTGRSA 
VVTGVVAVVT LGIALEPTLR ELLRLGAVPW TVLALAFGTL NLVRRARSTT ELVSGVALSS
AAAAVSAVVT AQGGAPLVPS LLASSVPVLG GALVATVQRL NEARRDRLSR PVVPPISTGA
DTGDARQALL LVALRAESML TAARDATAAA QARDLRTVAL QGLNVPGAAS GPRLTVRIDV
AAAGAEGEQE APEPDRVETP ALSEREGEIA RLLTTGASNA RIARELYLSE ATVKGHVSRM
MRRFDCGNRT QLALMAARWF G