Gene Ndas_4538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4538 
Symbol 
ID9248418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5381905 
End bp5382837 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content70% 
IMG OID 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_003682431 
Protein GI297563457 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAGCC GTAAGCGCAT GACGGCCCTC TCCGCCGCCG GCATGAGCGC CGCGCTCCTC 
CTGACCGCCT GCGGCGGCGG TGGCGGTGAG AGCCTGACCG GCCCGGAGGA GGGCGGCGAG
GACGCCAAGG AGATCAACAT CGCGCTGATC GCCTGGGAGG AGGGCATCGC CGTCACGCAC
ATGTGGCAGG CCATCCTGGA GGAGAAGGGC TACGACGTCA CGATCACCGA CGTGGACGTC
GCCCCGATGT ACCAGGGCGC GGCCAACGGC GACGTCGACC TGTTCCTCGA CACCTGGCTG
CCGGTGACGC ACGCCGACTA CTGGGAGGAC TACGGGGACC AGCTGGAGGA CCTCGGCGCC
TGGTACGACA ACGCCAAGCT GACCATCACC GTGCCCTCCT ACATGGAGGA CGTCAACAGC
ATCTCCGACC TGACCGACCA CGCCGACGAG CTGGGCGGCC GGATCGTGGG CATCGACCCG
GGCGCCGGGC TGACCCGCGT CACCCAGGAG GAGGCCATGC CGGGCTACGG CCTGGACGGG
GACTTCGAGC TGGTCACCTC CTCCACCGCC GCGATGCTCG CCGAGCTCGA CTCGGCGATC
ACCGAGGAGG AGCCCATCGT GGTGACCCTG TGGCGTCCCC ACCCGGCCTA CGCCCAGTAC
GACCTGAAGG ACCTGGAGGA CCCCGAGGGC CTGATGGGCG ACGCGGAGAC CATCCACGCC
GTCGGCCGTG ACGGCTTCGG TGAGGAGTAC CCCGAGCTCA CCGGTTGGCT GGAGAGCTTC
CAGCTCAGCG ATGACGAGCT GGCCACCCTG GAGGTCCAGA CCCTCCAGGA GCACCAGGAC
GACCCGGAGG CGGGCGCCCG CGCCTGGCTC GCGGAGAACC CCGAGTTCCT GGAGCGCACC
CTGGGCGGGG ACGCCGAGGG CCTGGAGTTC TAG
 
Protein sequence
MYSRKRMTAL SAAGMSAALL LTACGGGGGE SLTGPEEGGE DAKEINIALI AWEEGIAVTH 
MWQAILEEKG YDVTITDVDV APMYQGAANG DVDLFLDTWL PVTHADYWED YGDQLEDLGA
WYDNAKLTIT VPSYMEDVNS ISDLTDHADE LGGRIVGIDP GAGLTRVTQE EAMPGYGLDG
DFELVTSSTA AMLAELDSAI TEEEPIVVTL WRPHPAYAQY DLKDLEDPEG LMGDAETIHA
VGRDGFGEEY PELTGWLESF QLSDDELATL EVQTLQEHQD DPEAGARAWL AENPEFLERT
LGGDAEGLEF