Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4538 |
Symbol | |
ID | 9248418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 5381905 |
End bp | 5382837 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Substrate-binding region of ABC-type glycine betaine transport system |
Protein accession | YP_003682431 |
Protein GI | 297563457 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACAGCC GTAAGCGCAT GACGGCCCTC TCCGCCGCCG GCATGAGCGC CGCGCTCCTC CTGACCGCCT GCGGCGGCGG TGGCGGTGAG AGCCTGACCG GCCCGGAGGA GGGCGGCGAG GACGCCAAGG AGATCAACAT CGCGCTGATC GCCTGGGAGG AGGGCATCGC CGTCACGCAC ATGTGGCAGG CCATCCTGGA GGAGAAGGGC TACGACGTCA CGATCACCGA CGTGGACGTC GCCCCGATGT ACCAGGGCGC GGCCAACGGC GACGTCGACC TGTTCCTCGA CACCTGGCTG CCGGTGACGC ACGCCGACTA CTGGGAGGAC TACGGGGACC AGCTGGAGGA CCTCGGCGCC TGGTACGACA ACGCCAAGCT GACCATCACC GTGCCCTCCT ACATGGAGGA CGTCAACAGC ATCTCCGACC TGACCGACCA CGCCGACGAG CTGGGCGGCC GGATCGTGGG CATCGACCCG GGCGCCGGGC TGACCCGCGT CACCCAGGAG GAGGCCATGC CGGGCTACGG CCTGGACGGG GACTTCGAGC TGGTCACCTC CTCCACCGCC GCGATGCTCG CCGAGCTCGA CTCGGCGATC ACCGAGGAGG AGCCCATCGT GGTGACCCTG TGGCGTCCCC ACCCGGCCTA CGCCCAGTAC GACCTGAAGG ACCTGGAGGA CCCCGAGGGC CTGATGGGCG ACGCGGAGAC CATCCACGCC GTCGGCCGTG ACGGCTTCGG TGAGGAGTAC CCCGAGCTCA CCGGTTGGCT GGAGAGCTTC CAGCTCAGCG ATGACGAGCT GGCCACCCTG GAGGTCCAGA CCCTCCAGGA GCACCAGGAC GACCCGGAGG CGGGCGCCCG CGCCTGGCTC GCGGAGAACC CCGAGTTCCT GGAGCGCACC CTGGGCGGGG ACGCCGAGGG CCTGGAGTTC TAG
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Protein sequence | MYSRKRMTAL SAAGMSAALL LTACGGGGGE SLTGPEEGGE DAKEINIALI AWEEGIAVTH MWQAILEEKG YDVTITDVDV APMYQGAANG DVDLFLDTWL PVTHADYWED YGDQLEDLGA WYDNAKLTIT VPSYMEDVNS ISDLTDHADE LGGRIVGIDP GAGLTRVTQE EAMPGYGLDG DFELVTSSTA AMLAELDSAI TEEEPIVVTL WRPHPAYAQY DLKDLEDPEG LMGDAETIHA VGRDGFGEEY PELTGWLESF QLSDDELATL EVQTLQEHQD DPEAGARAWL AENPEFLERT LGGDAEGLEF
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