Gene Ndas_4533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4533 
Symbol 
ID9248413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5376098 
End bp5377018 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003682426 
Protein GI297563452 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.664024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.640764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA AGAGGGCGCC CCAGGCGCCG CGGAGCGCCG ACGCCGAGAG CGTCGGAGGT 
GCCGAACGCA CCCAGTTCCA GATGATCCTG TCCCGGTTCC TGCGCCACCG GGCCGCCATG
ATCAGCCTGG TCGTCCTGGT GGTCGTCGTC CTGGCCGCCT TCGTGGGCCC GCTCCTGTGG
AGGTGGGACC ACACCGTCCA CCTGGAGATC CCGCCGAGCG TGCCGCCCAA CGCGGACCAC
CCGCTGGGCA CCACCACCGC CGGGCACGAC GTCCTGGGCC AGCTCATGCG CGGCGCCCAG
CAGACGCTCA AGGTGGCGTT CACGGTGTCG GTCATGGGCA CCGTCATCGG CTCCCTGTGG
GGCGCCACGG CCGGTTACTA CGGCGGCCGG ATCGACGCGC TCATGATGCG CGTGGCCGAC
GTGTTCATGA TCGTGCCCCT GCTGGTGATG GTCGCCGCGA TCGCGGGCAA CGCCCGCGCC
GGGACCACCT GGTACGCGGT GGCCCTCATC ATCGGCTTCT TCTCGTGGGC GCAGATCGCC
CGCGTGGTGC GCAGCGTGGT CCTGTCCCTG CGCGAGCAGG AGTTCGTGGA GGCGGCCAAG
GCCGCGGGGG CCTCGCCCGG GTGGATCATC GTCCGCCACC TGCTGCCCAA CGCGGCCGGG
CCGATCATCG TCGCCGCCAC GCTGCTGATC GCGGTGGCGA TCCTGCTGGA GGCGGGCATG
TCCTTCCTCC AGTTCGGCAT CCAGCCCCCC GACATCTCGC TCGGCCAGAT GATCAGCGAC
GCGCGCACGG CCGTCTCCAC CAGGCCCTGG CTGTTCTACC CGCCGGGCCT GCTGCTGCTG
GTGATCTGCC TGACGATCAA CTTCATCGGC GACGGGCTGC GCGACGCCCT CGACCCACGA
CAGACCATGG TGCGGCGATG A
 
Protein sequence
MSEKRAPQAP RSADAESVGG AERTQFQMIL SRFLRHRAAM ISLVVLVVVV LAAFVGPLLW 
RWDHTVHLEI PPSVPPNADH PLGTTTAGHD VLGQLMRGAQ QTLKVAFTVS VMGTVIGSLW
GATAGYYGGR IDALMMRVAD VFMIVPLLVM VAAIAGNARA GTTWYAVALI IGFFSWAQIA
RVVRSVVLSL REQEFVEAAK AAGASPGWII VRHLLPNAAG PIIVAATLLI AVAILLEAGM
SFLQFGIQPP DISLGQMISD ARTAVSTRPW LFYPPGLLLL VICLTINFIG DGLRDALDPR
QTMVRR