Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4525 |
Symbol | |
ID | 9248405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5366643 |
End bp | 5367293 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003682418 |
Protein GI | 297563444 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.397871 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAGA CGACCCCGGC GCCGGACACC CGCGCCTCCT CCGGCTCCGA GGCGCCAGCG CCGCGGAGGC GGGTGAACCG GCGCGAGCAG ATCCTGCGCA CGGCGGCCGA CGTGTTCGCC TCGCAGGGCT TCCACAACAC CTCGCTGGCC GACATCGCGG CGACGCTCAA CATCACCCCG GCGGGGGTCC TGCACCACTT CGGCTCCAAG ACCGACCTGC TCACCGCGGT CCTGGAGCTG CGCGACGACA CCGACCCGGC GCCGGAGGGC AGCCGGATGC TGGACCACCT GGTGTCGACC GCCGAGCGCA ACGCCGAGCG GCCGGGGACC ACGCAGCTGT ACGCGGTGCT GTCGGCGGAG AGCGCCACCG ACGGGCACCC GGCGCAGGAC TGGTTCCGGG ACCGCTACAC CGTGCTGCGC GGGGAGATCG GGAACGCCGT GCTGGACCGG CTCGGGCCGG GGCACCGGGA GGCCGCGGAC ACCCCGGGGC CGGACGGGCA CACCCCGGCG GAGGCCGCGG CGTCGGCGGT CATCGCCGTG ATGGACGGGC TCCAGGTGCA GTGGCTCCTC GACCCGGGTG CCGTGGACAT GGCCGCCGTC ACCGAGCTGG TGATCGACTC CGTGGTGGCC CGGCTGTCCC TGCAGGACTG A
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Protein sequence | MSETTPAPDT RASSGSEAPA PRRRVNRREQ ILRTAADVFA SQGFHNTSLA DIAATLNITP AGVLHHFGSK TDLLTAVLEL RDDTDPAPEG SRMLDHLVST AERNAERPGT TQLYAVLSAE SATDGHPAQD WFRDRYTVLR GEIGNAVLDR LGPGHREAAD TPGPDGHTPA EAAASAVIAV MDGLQVQWLL DPGAVDMAAV TELVIDSVVA RLSLQD
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