Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4479 |
Symbol | |
ID | 9248358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5317396 |
End bp | 5318178 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_003682374 |
Protein GI | 297563400 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGACGCT TCGACAAGCA GACCGTTCTC GTCACCGGCG GCACTGGCGG GCAGGGGGCC AGCCACGTTC GGGCCTACCA CGAGGAGGGG GCGAACGTTG TCATCGCCGC GCTCTCCGAA GGGCCTGGCA AGGAGCTCGC CGCCGAACTC GGCGAGCGGG CACTGTTCGT TCGTCTGGAC GTCACCGACG AGGACGCCTG GGCGGCGGCG GTCACCGAGA CCGAACGCCG GTTCGGTCCG ATCGGGATCC TGGTCAACAA CGCCGGCGTC CAGAACCCCG CGGTGCCGAT CGAGGCCACC GAACGGCGGG TCTGGGACCG CGTACTCGAC GTCAACCTCA CCGGCACGTT TCTCGGCACC AAGACCGTGA CCCCGTCACT GCGCCGCAAC GGCGGCGGAG TGATCGTCAA CATCGCCTCC ACGATGGCCC ACGCCGGCAC CTCGCTCTAC GCGCCGTACG TCGCCAGCAA GTGGGCGTTG CGCGGGCTCA CCAGGACCGC CGCGCTGGAG CTGGGTCGAG ACGGCATCCG GGTCAACTCC ATCCACCCCG GCGTCATCTC CACCCCGTTG GTCAACGAAC CGATCGCCGG TCAGCCGCCC ATCGCCGACT TCTACTCGCC CGAGCCGTAC GCCATCCCCC GAATGGGAAC CCCGGCCGAC ATCACCGCAC TCCTCCTCTA CCTCACCTCG GCCGACGCCT CGTTCGTCAC GGGCTCGGAG TTCGTCGCGG ACGGCGGGCT CCTGCTCGGC CCCGCCCTGC AACCCGACAC GGCGGCAGCC TGA
|
Protein sequence | MGRFDKQTVL VTGGTGGQGA SHVRAYHEEG ANVVIAALSE GPGKELAAEL GERALFVRLD VTDEDAWAAA VTETERRFGP IGILVNNAGV QNPAVPIEAT ERRVWDRVLD VNLTGTFLGT KTVTPSLRRN GGGVIVNIAS TMAHAGTSLY APYVASKWAL RGLTRTAALE LGRDGIRVNS IHPGVISTPL VNEPIAGQPP IADFYSPEPY AIPRMGTPAD ITALLLYLTS ADASFVTGSE FVADGGLLLG PALQPDTAAA
|
| |