Gene Ndas_4479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4479 
Symbol 
ID9248358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5317396 
End bp5318178 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003682374 
Protein GI297563400 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGCT TCGACAAGCA GACCGTTCTC GTCACCGGCG GCACTGGCGG GCAGGGGGCC 
AGCCACGTTC GGGCCTACCA CGAGGAGGGG GCGAACGTTG TCATCGCCGC GCTCTCCGAA
GGGCCTGGCA AGGAGCTCGC CGCCGAACTC GGCGAGCGGG CACTGTTCGT TCGTCTGGAC
GTCACCGACG AGGACGCCTG GGCGGCGGCG GTCACCGAGA CCGAACGCCG GTTCGGTCCG
ATCGGGATCC TGGTCAACAA CGCCGGCGTC CAGAACCCCG CGGTGCCGAT CGAGGCCACC
GAACGGCGGG TCTGGGACCG CGTACTCGAC GTCAACCTCA CCGGCACGTT TCTCGGCACC
AAGACCGTGA CCCCGTCACT GCGCCGCAAC GGCGGCGGAG TGATCGTCAA CATCGCCTCC
ACGATGGCCC ACGCCGGCAC CTCGCTCTAC GCGCCGTACG TCGCCAGCAA GTGGGCGTTG
CGCGGGCTCA CCAGGACCGC CGCGCTGGAG CTGGGTCGAG ACGGCATCCG GGTCAACTCC
ATCCACCCCG GCGTCATCTC CACCCCGTTG GTCAACGAAC CGATCGCCGG TCAGCCGCCC
ATCGCCGACT TCTACTCGCC CGAGCCGTAC GCCATCCCCC GAATGGGAAC CCCGGCCGAC
ATCACCGCAC TCCTCCTCTA CCTCACCTCG GCCGACGCCT CGTTCGTCAC GGGCTCGGAG
TTCGTCGCGG ACGGCGGGCT CCTGCTCGGC CCCGCCCTGC AACCCGACAC GGCGGCAGCC
TGA
 
Protein sequence
MGRFDKQTVL VTGGTGGQGA SHVRAYHEEG ANVVIAALSE GPGKELAAEL GERALFVRLD 
VTDEDAWAAA VTETERRFGP IGILVNNAGV QNPAVPIEAT ERRVWDRVLD VNLTGTFLGT
KTVTPSLRRN GGGVIVNIAS TMAHAGTSLY APYVASKWAL RGLTRTAALE LGRDGIRVNS
IHPGVISTPL VNEPIAGQPP IADFYSPEPY AIPRMGTPAD ITALLLYLTS ADASFVTGSE
FVADGGLLLG PALQPDTAAA