| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4424 |
|---|
| Symbol | |
|---|
| ID | 9248299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 5265163 |
|---|
| End bp | 5266656 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_003682319 |
|---|
| Protein GI | 297563345 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.107897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.578311 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTGCCTG CCGACCAAGC GCCAACCCTG GACGCGCGTC TGACAGACGC CATCGCGACG
TTCAACAACG ACTTCTTCTG GTCCTGGATC CTGATCCCGC TCCTCGTGGT GGTGAGCCTC
TACCTCACCG TCCGGACGGG CGCCGTCCAG ATCCGGATGC TCCCGGAGAT GTTCCGGGTG
CTCAAGAGCA AGCCCGAGAC CGCTCCTGAC GGGGGCAAGG CGGTCTCCTC CATCCAGGCG
TTCATGATCT CGGCCGCGGC CCGCATCGGC ACGGGCAACA TCGTCGGCGT GGCCGTCGCC
ATCTCCCTGG GCGGCCCGGG CGCCGTCTTC TGGATGTGGA CGATGGCGAT CGTGGTCTGC
GCGGCCAGCT TCGTCGAGTC CACCCTGGCC CAGCTCTACA AGGTCAGGGA CTCCACCGGC
TACCGGGGCG GACCGGCCTA CTACATGGAG AAGGGCCTGG GCCAGCGCTG GATGGGCGTG
CTCTTCGCCA TCGTCCTCAT TCTGACCTTC CCGATGGTCT TCAACGCCGT GCAGAGCAAC
ACCATCGCCG GGGCCGTCAC CAACTCCGCC CAGAACATGA ACGTGGACGC GGGCCTGGGG
CTGTCGGCCG CGGTCGGGGT CGTGCTCGTG GCGGTCACCG CGATGGTGAT CTTCGGCGGT
GTGCGCAGGA TCGCCAACAC CGCGCAGGCG CTGATCCCGG CCTTCGCGCT GATCTACCTG
ATCATGGGCG TCATCATCGT GGGGATGAAC TTCGAGCGCG TCCCCGGGAT GTTCGCGCTC
ATCTTCGAGC ACGCCTTCGG CATCCGCGAG TTCGCCGCCG CCGGTCTGGG CACGGTGATC
ATCCAGGGCG TGCGCCGGGG CATGTTCTCC AACGAGGCGG GCCTGGGATC GGCTCCCAAC
GCCGCGGCCA GCGCCGCCGT CACCCACCCC GCCAAGCAGG GCCTGGTGCA GACCCTCGGC
GTCTACTTCG ACACCCTCGT GGTCTGCTCC ATCACGGCCT TCATCATCCT CATCGGCTAC
GAGGGCGGCT CCGAGCGCGA GCTGGAGGGC GACCTCACCC AGATCGCGGT CACCGAGGCC
CTGGGCCCCT GGGCGCTGCA CCTGATGACG CTGATCATCC TCCTGGTCGC GTTCACGTCG
GTGCTGGGCA ACTACTACTA CGGCGAATCG AACCTGGAGT ACCTGACCGC CGACCGGCGC
GTCATGCTCG GCTACAAGAT CGTCTTCCTC GTGGCCAGCT TCCTCGGCTC GCTGGGCTCG
ATCGACCTGG TCTGGACGCT GGCGGACACG ACCATGGGCA TGATGGCGCT GATCAACCTC
GTGGCCATCA CACCGCTGGC CGCGATCGCG GCACGGGTGC TCAAGGACTA CAACGACCAG
CGGCGCCAGG GCATCGACCC CGTGTTCACG CGGGACCGGC TGCCCGACCT GCGCGGAGTG
GAGTGCTGGG AGCCCAGGGA GAGGGAGGCT GCGGCCGAGA CCGACAAGGT CTGA
|
|---|
| Protein sequence | MLPADQAPTL DARLTDAIAT FNNDFFWSWI LIPLLVVVSL YLTVRTGAVQ IRMLPEMFRV
LKSKPETAPD GGKAVSSIQA FMISAAARIG TGNIVGVAVA ISLGGPGAVF WMWTMAIVVC
AASFVESTLA QLYKVRDSTG YRGGPAYYME KGLGQRWMGV LFAIVLILTF PMVFNAVQSN
TIAGAVTNSA QNMNVDAGLG LSAAVGVVLV AVTAMVIFGG VRRIANTAQA LIPAFALIYL
IMGVIIVGMN FERVPGMFAL IFEHAFGIRE FAAAGLGTVI IQGVRRGMFS NEAGLGSAPN
AAASAAVTHP AKQGLVQTLG VYFDTLVVCS ITAFIILIGY EGGSERELEG DLTQIAVTEA
LGPWALHLMT LIILLVAFTS VLGNYYYGES NLEYLTADRR VMLGYKIVFL VASFLGSLGS
IDLVWTLADT TMGMMALINL VAITPLAAIA ARVLKDYNDQ RRQGIDPVFT RDRLPDLRGV
ECWEPREREA AAETDKV
|
|---|
| |