| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4380 |
|---|
| Symbol | |
|---|
| ID | 9248255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5214953 |
|---|
| End bp | 5216032 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstA |
|---|
| Protein accession | YP_003682275 |
|---|
| Protein GI | 297563301 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACACGA CGACCACGCA GCCTCCCGGC CCCGAAGCGG GCTCCACCGC GACCGACCTG
CGCCGCGGCT CCCTGCCACA GCACTTCCCC GCCGCCCTGC TGGCCTCCTC CGCCGCCGTG
GTGGCCGGGG TCCTGCTGGC CTTCTCGTCC TTCGGGTTCC TGCTGTGGGG CCTGCTCACC
GCCGCCGCGT ACGTGGTGAT CGTCGTGACG GCCTCCGCCC GCGTCGAGGG CGGCCGCAAG
GCCAAGGACC GGCTGGTCAC CTCGCTGGTC TACCTGTGCT TCCTGCTGGC GATGCTGCCG
CTGGTGTCGG TGCTGTGGAC GGTGCTGAGC AACGGCATCG TCCGGTTCGA CGCCTACTTC
CTCACGGTGT CCATGAACGG CGTCCTGCCG AGCATGGACG CGGGAGGCGT GTACCACGCG
ATCGTGGGCA CCCTGGCGAT CACCGGCATG GCCACGCTCA TCTCGGTGCC CATCGGCGTG
ATGACCGCCG TGTACCTCGT GGAGTACGCC GAGGGCCGCA TGAAGCGGAT CATCGTGTTC
TTCGTCGACG TCATGACGGG CATCCCGTCG ATCGTCGCCG GACTGTTCGT GGTGGCGCTG
TGGATGATCC TGTTCGGCCC GGGCCGGACC AACGGCGCGG CGGGCGCGAT CGCGCTGGCG
GTGCTGATGA TCCCGGTCGT GGTGCGCTCC AGCGAGGAGA TGCTGCGGCT GGTGCCGCAG
GACCTGCGTG AGGCCTCCTA CGCCCTGGGG GTGCCCAAGT GGCGGACGAT CACCAAGGTG
GTGCTGCCCA CCTCCGCGGC CGGCCTGACC ACAGGAATCA TGCTCGCCAT CGCCCGCGTT
ATCGGAGAGA CGGCTCCCCT GATCCTCACC ACGGGGTCGT CCGCGGTGTC GATCAACTGG
AACCTGTTCG ACGGGCAGAT GATGAACCTC CCGGTGTTCA TCTACTCGCA GGTCCGCATG
GGCGGCGCCG TCAACTACGA GAGGGCCTGG GCGGCGGCGC TGACCCTGAT CCTGGTGGTG
ATGCTGCTGT TCTTCCTGGC CCGCATGATC GGCCGCCTGT TCGCGCCGAA GGCCCGTTGA
|
|---|
| Protein sequence | MDTTTTQPPG PEAGSTATDL RRGSLPQHFP AALLASSAAV VAGVLLAFSS FGFLLWGLLT
AAAYVVIVVT ASARVEGGRK AKDRLVTSLV YLCFLLAMLP LVSVLWTVLS NGIVRFDAYF
LTVSMNGVLP SMDAGGVYHA IVGTLAITGM ATLISVPIGV MTAVYLVEYA EGRMKRIIVF
FVDVMTGIPS IVAGLFVVAL WMILFGPGRT NGAAGAIALA VLMIPVVVRS SEEMLRLVPQ
DLREASYALG VPKWRTITKV VLPTSAAGLT TGIMLAIARV IGETAPLILT TGSSAVSINW
NLFDGQMMNL PVFIYSQVRM GGAVNYERAW AAALTLILVV MLLFFLARMI GRLFAPKAR
|
|---|
| |