| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4379 |
|---|
| Symbol | |
|---|
| ID | 9248254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5213991 |
|---|
| End bp | 5214953 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | phosphate ABC transporter, inner membrane subunit PstC |
|---|
| Protein accession | YP_003682274 |
|---|
| Protein GI | 297563300 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA CGGACGCCCC CGAGGCGGCA CCGCCGCCCA CGGGCAAGCG CCGGATCGGC
GACGTCGCCT TCGCCGGGCT CGCCCGAGGC TCGGGCATCC TGATCCTGCT GATCCTCGCC
GGTGTCGCCG CCTTCCTGCT CGTGCAGGCC TGGCCGTCCC TGACCGCGAA CACGGTGAAC
TTCCTCACCA GCACGGAGTG GGACCCCAAC GTCCGCGAGG AACCCGCGTT CGGTGTCGCC
GCCCTGGCGT TCGGCACCGT CCTGGCCGCG GCCATCGCGC TGCTGCTGGC CACCCCGGTG
GCGATCGGGA TCGCGCTGTT CATCGTCTTC TACGCGCCGC GCAGGCTCGC CTCGGTACTC
GGCTACCTGG TGGACCTGCT GGCCGCCATC CCCAGCGTCG TCTACGGCCT GTGGGGCATC
GGCTTCCTCG CGCCGGAACT GGTCCCCGTC TACCAGGCGC TGACGCGCTA CCTGGGCTGG
ATCCCGCTGT TCCAGGGCCC CGCCTCCACC TCGGCCCGCA CCATCCTCAC CGCGGGCGTG
GTGCTGGCCG TCATGATCCT GCCGATCATC ACCGCTATGG CGCGCGACGT GTTCCACCAG
ACCCCGCAGG GGCACCGCGA GGCCGCCCTG GCCATGGGCG CCACCCGCTG GGAGATGATC
CGCCTGGCCG TGCTGCCCTT CGGCAGATCC GGCGTGGTGG GCGGCGCCAT GCTCGGCCTG
GGCCGCGCCC TGGGCGAGAC CATGGCCGTC GCGATGATCC TGTCCCCCTC CCTCATCGTC
TCCTGGAACC TGTTGCAGAG CGGCAACCAG ACCATCGCCG CGCACATCGC CCTCCAGTAC
CCCGAGGCCA CCGGGTACGG CGTCTCCGCG CTGATCGCCG CCGGGCTGGT CCTGTTCGCG
ATCACCCTCG TCGTCAACAT GGGCGCGCGC TACGTCGTGA CCCGGGGGAG CAAGGAGTCT
TGA
|
|---|
| Protein sequence | MTTTDAPEAA PPPTGKRRIG DVAFAGLARG SGILILLILA GVAAFLLVQA WPSLTANTVN
FLTSTEWDPN VREEPAFGVA ALAFGTVLAA AIALLLATPV AIGIALFIVF YAPRRLASVL
GYLVDLLAAI PSVVYGLWGI GFLAPELVPV YQALTRYLGW IPLFQGPAST SARTILTAGV
VLAVMILPII TAMARDVFHQ TPQGHREAAL AMGATRWEMI RLAVLPFGRS GVVGGAMLGL
GRALGETMAV AMILSPSLIV SWNLLQSGNQ TIAAHIALQY PEATGYGVSA LIAAGLVLFA
ITLVVNMGAR YVVTRGSKES
|
|---|
| |