Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_4328 |
Symbol | |
ID | 9248203 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 5162505 |
End bp | 5163095 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003682223 |
Protein GI | 297563249 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCA CAGGGGGGTC GGGAGAGGTG CCGGCCCGCG GCAGGCGGGC CGACGCGGTG CGCAACCAGC AGAAGCTGCT CACCGCCGCC GCCGCGGTGT TCGTCACCTC CGGAGTCGAC GCGCCGATCC GGGAGATCGC GGCCCGGGCG GGGGTCGGGA TGGGGACGAT CTACCGCCAC TTCCCCACGC GGGCGGACCT GGTCGTCGCC GTCTACCGCC ACCAGGTCGA GGCCTGCGCC GAGGCCGGCC CGAGGCTACT GGACGAGGCC GCCTCCCCGT TCGCCGCGCT CCGCGCGTGG GTGGACCTGT TCGTCGACTT CCTGGTCACC AAGCACGGGC TGGCAGGTGC GATGCGGTCG GACAGCGGCG GTTTCGAGGC CCTGCACGCC TACTTCCTCG ACCGCCTGGT GCCCGTCTGC ACGCGGTTGC TCGACGCCGC GGTCGAGGCC GGGGAGATCG GGCCCGGCAC GCGGGCCTAC GAGCTGATGC GCGGGATCGG CAACCTCTGC GTCGGGAGCG ACCCCCGCTA CGACCCGCGC CGACTGGTCG AACTGCTCCT GCGGGGACTG CGGCAGCCAC AGCCCTCCTG A
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Protein sequence | MPSTGGSGEV PARGRRADAV RNQQKLLTAA AAVFVTSGVD APIREIAARA GVGMGTIYRH FPTRADLVVA VYRHQVEACA EAGPRLLDEA ASPFAALRAW VDLFVDFLVT KHGLAGAMRS DSGGFEALHA YFLDRLVPVC TRLLDAAVEA GEIGPGTRAY ELMRGIGNLC VGSDPRYDPR RLVELLLRGL RQPQPS
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